Gene Psyr_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3445 
Symbol 
ID3368972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4109038 
End bp4109478 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID637653796 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_236515 
Protein GI66046674 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.934306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGCT GGCTGAGTGT TCTGCTGACC CTGCCATCGC TGGCCTGGGC CGCCGAACCC 
GCCGCTCAGG CGGCGCCTGC GCAGGTGGCC AACACGGTCT CCGGCGGCAT GGGCGGGCAG
GTGGTGCAAC TGCTGTTCGG TCTGATCCTG GTGATTGGTC TGATCTTCGT GCTCGCCTGG
CTGATGCGCC GGGTGCAGCG CGTCGGGCCG AACAGCAATC AGGTGATCGA GCTGGTAAGT
TCGCGCGCGC TGGGGCCGCG TGATCGGCTG GTGCTGGTGC AGATCGGCAA TGAACAGGTG
CTGCTGGGCA TTACGCCCGG GCGAATCACG CCTCTGCATG TGCTCAAGGA GCCGGTGCAG
GTGCCGGTGC GCGAGCAGGC CACCCCAGAA TTCGCTCAGC GCCTGATGGA GCTGATGGGC
AAGGATAAGG ACAAGAAGTG A
 
Protein sequence
MRRWLSVLLT LPSLAWAAEP AAQAAPAQVA NTVSGGMGGQ VVQLLFGLIL VIGLIFVLAW 
LMRRVQRVGP NSNQVIELVS SRALGPRDRL VLVQIGNEQV LLGITPGRIT PLHVLKEPVQ
VPVREQATPE FAQRLMELMG KDKDKK