| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3437 |
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| Symbol | fliA |
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| ID | 3368964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4100576 |
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| End bp | 4101316 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637653788 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_236507 |
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| Protein GI | 66046666 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0675365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.612127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCGA GCGGCTACCA GATGTACAGC AAGACTTCCC GTAATTCACA ATACGAGTTG
ATCGAGCGCT ATGCGCCCTT GGTCAAGCGT ATCGCTTATC ATCTGCTGGC GCGCTTGCCG
GCCAGCGTGC AGGTCGAGGA TCTGATCCAG GCCGGCATGA TCGGCCTGCT TGAAGTCTCC
ACCAAGTATG ATTCCACCAA GGGTGCGAGT TTCGAGACCT ATGCCGGCAT CCGCATCCGT
GGTGCGATGC TCGATGAAGT GCGCAAGGGG GACTGGGCGC CACGCTCGGT ACACCGCAAT
ACGCGCATGG TGAGTGACGC AATTCGGGCA ATTGAAGCTA AAACCGGCCG TGACGCTAAA
GATCACGAGG TTGCGGCCGA ACTCCAGTTA AGTCTCGATG ATTACTACGG GATTTTGAAC
GATACCTTGG GCAGCCGCCT CTTCAGTTTC GACGACCTGC TGCAGGACGG CGATCATGAA
GGGCTGCACG AGGATGGCGC AAGCGGTTCG CTTGAGCCGT CGCGCGACCT GGAAGACGAG
CGCTTCCAGG CTGCGTTGGC CGATGCAATT GCCAATCTGC CAGAGCGTGA GCGTCTGGTG
TTGGCGCTGT ACTACGACGA AGAGCTGAAC CTCAAGGAAA TCGGAGAGGT TCTGGGGGTC
AGCGAATCTC GGGTCAGTCA GTTACACAGC CAGTGCGCAG CTCGTTTGCG AGGGCGTTTG
GGGGAGTGGC GAGCGCGTTG A
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| Protein sequence | MTASGYQMYS KTSRNSQYEL IERYAPLVKR IAYHLLARLP ASVQVEDLIQ AGMIGLLEVS
TKYDSTKGAS FETYAGIRIR GAMLDEVRKG DWAPRSVHRN TRMVSDAIRA IEAKTGRDAK
DHEVAAELQL SLDDYYGILN DTLGSRLFSF DDLLQDGDHE GLHEDGASGS LEPSRDLEDE
RFQAALADAI ANLPERERLV LALYYDEELN LKEIGEVLGV SESRVSQLHS QCAARLRGRL
GEWRAR
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