Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3435 |
Symbol | |
ID | 3368962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4099140 |
End bp | 4099925 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637653786 |
Product | chemotaxis phosphatase, CheZ |
Protein accession | YP_236505 |
Protein GI | 66046664 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG3143] Chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.244587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.637664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAACA ATGATTCGAT GGCCGACTTT GAGTCGACCT TAAAAAGACA CGCGCAGGAA CTTGTCACCA GCCTTGAAAA GGGTCGTTTT GGTGACGCTG TGCAACTGAT CCACGAACTC AATCAGACAC GCGACCGCGG CCTTTATCAG GAAGTGGGCA AGCTGACTCG TGAGCTGCAC AGTGCAATCG TAAACTTTCA CATTGATCCG CACATGCCTC AAGCCGAGGA AGTGTCGCAG ATCACGGATG CTACCGAACG CCTGTCGTAT GTGGTGAGGC TGACCGAGAA TGCGGCCAAC CGCACCATGG ACCTGGTGGA GGAGAGTACG CCGGTCATGA ACGGCCTGAG TTCCGACGCC AAGGCGTTGA GCGACGACTG GGGACGTTTC ATGCGCCGCG AAATCGGTGC CGAAGAGTTC CGCGAGCTGG CCAAGCGGGT CGATGGTTTT CTGACGCGTA CCGAGAAGGA AACCCATCAG GTTTCCGCAC ATCTGAATGA CATTCTGCTC GCCCAGGATT ACCAGGACCT TACCGGTCAG GTCATCAAGC GTGTGACGCA ACTGGTCACT GAAGTCGAGA GCAATCTGCT CAAACTGGTG CTCATGGCCA GTCATGTCGA TCGCTTCGCA GGCATCGAAC ATGACGAACA ATCCATCCTC AATGAAAAAG ATCCTAAAAA ACATCTCGCT CAGGGTGAAG GTCCGCAGAT TCATGCCGAT AAACGTGAAG ACGTCGTATC CGGACAGGAT GATGTAGACG ATCTGCTATC GAGCCTCGGC TTCTAA
|
Protein sequence | MDNNDSMADF ESTLKRHAQE LVTSLEKGRF GDAVQLIHEL NQTRDRGLYQ EVGKLTRELH SAIVNFHIDP HMPQAEEVSQ ITDATERLSY VVRLTENAAN RTMDLVEEST PVMNGLSSDA KALSDDWGRF MRREIGAEEF RELAKRVDGF LTRTEKETHQ VSAHLNDILL AQDYQDLTGQ VIKRVTQLVT EVESNLLKLV LMASHVDRFA GIEHDEQSIL NEKDPKKHLA QGEGPQIHAD KREDVVSGQD DVDDLLSSLG F
|
| |