| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3414 |
|---|
| Symbol | |
|---|
| ID | 3368941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4079387 |
|---|
| End bp | 4079995 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637653765 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_236484 |
|---|
| Protein GI | 66046643 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0597614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATG ATGCGCTCGA AAAAAACATC GGTCTGCTGG CCGTCTTCAT GGTGATTGCC
GTGAGCATCG GCGGGCTGAC GCAGATCGTC CCGCTGTTCT TTCAGGACGT CACCAACCAG
CCTGTCGAGG GCATGAAGCC GCGCAGCGCG CTTGAGGTGG AAGGCCGTGA TGTGTTCATC
GCCAACGGCT GCGTCGGTTG CCACTCGCAG ATGATCCGCC CGTTGCGCGC CGAAACCGAG
CGCTACGGGC ATTACTCGGT GGCAGGCGAA AGCGTCTGGG ACCACCCCTT CCTGTGGGGC
TCCAAACGCA CCGGGCCGGA CCTGGCAAGG ATCGGCGGTC GCTACTCGGA CGAGTGGCAC
CGGGTACACC TGAACAACCC GCGCGACCTG GTTCCGACCT CGATCATGCC GGCATACCCG
TTTCTGGCCG AGAAGACCAT CGACAGCACG CAGACTGCGA AAAAGCTGCA GGTGCTGCGC
ACCCTTGGCA CCCCGTACAC CGACGCGGAT ATCGCCGGTG CAGCGGCTGC GGTGCAGGGC
AATACCGAAA TGGACGCGCT GGTGGCCTAT CTGCAAGGCC TTGGCACGCT CATCAAGAGC
AAACGGTGA
|
|---|
| Protein sequence | MKHDALEKNI GLLAVFMVIA VSIGGLTQIV PLFFQDVTNQ PVEGMKPRSA LEVEGRDVFI
ANGCVGCHSQ MIRPLRAETE RYGHYSVAGE SVWDHPFLWG SKRTGPDLAR IGGRYSDEWH
RVHLNNPRDL VPTSIMPAYP FLAEKTIDST QTAKKLQVLR TLGTPYTDAD IAGAAAAVQG
NTEMDALVAY LQGLGTLIKS KR
|
|---|
| |