| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3408 |
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| Symbol | |
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| ID | 3368935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4068972 |
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| End bp | 4071101 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637653759 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_236478 |
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| Protein GI | 66046637 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.560212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.144243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACT CTCCGCTTAG GGAGATTGTC AGCGACCGGA CAGAGTATGT GGATGCGGCC
AGCGCATTTC ATAATTACTC TGTATACGGT ACTGGATACC TTCATTCCGA TGGGGCTGCG
ATCAAACGTA TCTCTTCTTA TGGCGGAAGG ACCGAATTAA CGGGCAATAC CCTGGTCAAG
GATGGAATGT TGTCTGACGG CGACGCTCGA GTTTCAGTTA AAGACTCCAC CATCCTCAGC
GATAGCACGA TAGCGCTCGT GGTGCAGGGC AACTCGAACA TGACACTTGA ACACAGTGTC
GTTGAGGGAA AAGGGGGCGG CATCACCGTT GCCGAGGACG CCTTCGCCCT GATCAGCAAT
ACACAGGTCG GCTCGCTGCA GGGTGAAGTT GGTAGACACA CTGGCTGGGG CGTTGGCATT
TTTGGCGCTC GCGCTGACAT CACTTCCCGA AGCTACATAA AAGGCTTGTC TCACGGGGTA
TGGTTCACTC ATCCACGCCT CACAGTGGGT GATGGAACGC AGTTCAATTA CGGTCAACTG
AGCATCGACA ACTCTACCGT CGAAGGGCTG ACAGGAGCCG CCATAAGGGT GGAAGGGCGT
GAGGGTATAA GCCACCTTGC GGATATTGAG ATCAAGAACA ACACCCTCCT GCTGTCCGGC
AATGGCATGC TTCTTGAGGT TCTGAACCAG AGCACCGCCA ACTTCAACGT CGACAACAGC
ACCCTCAATG GCAACCTTGT CGCCGATGAC ACCAGCACCC TGAACATCAC GCTGCAAAAC
GGCGCGCAAT TGAACGGCGA CATCGTCAAT GGCAACCGTC TGGCGATTAC CTCGGGTAGT
CACTGGCAGA TGCAGGGCGA CAATGCCGTC AGGTCGCTTT CCCTGCAGGG TGGCAGGGTT
TCGTTTGCTG GCGAAGGGTT TCATACCCTT TCGCTGAATG AGTTGTCAGG CGCTGGCACG
TTCGGCTTGC GCGTGGATCT GGACAACGGC GTCGGAGACC TCATCGACGT CAACGGCCAG
GCCAGTGGGC AGTTCGGCTT GCGCGTGCGC AATACGGGGG TGGAGGTTGT GTCTGCCGAC
ATGGCACCGC TCAAGGTGGT GCATACCGAA GGTGGCGACG CGCAATTCAG CCTGCTGGGC
GGGCGGGTTG ACCTGGGGGC CTATTCGTAT TTGCTGGAGC AGCAGGGCAA TGACTGGTTC
ATCGTCGGTA AAGACAAGGT CATAAGCCCT TCGACCCAGA GCGCGCTTGC CCTTTACAGC
GCGGCACCTG CGATCTGGAT GAGTGAGCTC TCTACCTTGC GTTCGCGCAT GGGTGAGGTT
CGTGCAAGCG GCAGGGCGGG CGGCTGGATG CGTGCCTATG GCAACAGGCT GAATGCCACG
ACCAGTGACG GTGTCGACTA CCGGCAGAAA CAAAGTGGCC TGTCGCTGGG TGCCGATGCG
CCCGTCGAGG TCAGCAATGG CCAACTGGTG GTCGGTGTGC TGGGAGGGTA CAGCACCTCC
GGTATCGATT TGAGCCGTGG CACCACGGGT AAAGTCGACA GCTACTATGC AGGCGCCTAT
GCCACCTGGC TGTCGGACGA TGGCTACTAC GTTGACGGCG TGCTCAAACT CAACCGCTTT
CGCAACAAGG CAGATGTTGC CATGAGCGAT GCAAGCAAGG CCAAGGGTGA CTACACCAAC
AACGGGATAG GGGGCTGGGT CGAGTTCGGC CGCCACATCA AACTGGCGGA CGATTACTTT
CTCGAACCGT TCGCTCAGTT GTCCAGTGTC GTCGTTCAGG GGCAGGAGCT GCGCCTGGAC
AACGGCATGA AAGCGAAGAA CGACCAGACC CAATCGGTAT TGGGCAAGGT GGGCACCTCG
CTGGGCCGCA GTGTTGCGCT CAAGGATGGC GGAGTATTGC AGCCTTATGT ACGTGTCGCC
ATTGCACAGG AGTTTTCGCG CCGCAACGAG GTGAAAGCCA ACGATGTGAA ATTCGATAAC
AGCCTGTTCG GTTCGCGCGG CGAACTGGGA GCCGGGGTAT CGGTGTCGCT GTCCGAGCGT
CTGAAACTGC ACGCGGACTT CGATTACATG AAAGGTCGGC ATATCGAGCA ACCCTGGGGA
GCGAATGTGG GGCTGCGCCT GGCATTCTGA
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| Protein sequence | MADSPLREIV SDRTEYVDAA SAFHNYSVYG TGYLHSDGAA IKRISSYGGR TELTGNTLVK
DGMLSDGDAR VSVKDSTILS DSTIALVVQG NSNMTLEHSV VEGKGGGITV AEDAFALISN
TQVGSLQGEV GRHTGWGVGI FGARADITSR SYIKGLSHGV WFTHPRLTVG DGTQFNYGQL
SIDNSTVEGL TGAAIRVEGR EGISHLADIE IKNNTLLLSG NGMLLEVLNQ STANFNVDNS
TLNGNLVADD TSTLNITLQN GAQLNGDIVN GNRLAITSGS HWQMQGDNAV RSLSLQGGRV
SFAGEGFHTL SLNELSGAGT FGLRVDLDNG VGDLIDVNGQ ASGQFGLRVR NTGVEVVSAD
MAPLKVVHTE GGDAQFSLLG GRVDLGAYSY LLEQQGNDWF IVGKDKVISP STQSALALYS
AAPAIWMSEL STLRSRMGEV RASGRAGGWM RAYGNRLNAT TSDGVDYRQK QSGLSLGADA
PVEVSNGQLV VGVLGGYSTS GIDLSRGTTG KVDSYYAGAY ATWLSDDGYY VDGVLKLNRF
RNKADVAMSD ASKAKGDYTN NGIGGWVEFG RHIKLADDYF LEPFAQLSSV VVQGQELRLD
NGMKAKNDQT QSVLGKVGTS LGRSVALKDG GVLQPYVRVA IAQEFSRRNE VKANDVKFDN
SLFGSRGELG AGVSVSLSER LKLHADFDYM KGRHIEQPWG ANVGLRLAF
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