Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3400 |
Symbol | |
ID | 3368927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4056800 |
End bp | 4057984 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653751 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_236470 |
Protein GI | 66046629 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0126015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.687523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCAC AAAAAAGCGA TGTCCTGATT ATCGGCGGCG GCTTCATGGG CGCATCCTCC GCGTTTTTTC TGCGCCAGCA CGGCCGTTCG GTCACCCTGC TGGAGCGCGA CCAGATCGGC CAATATGCCA GCGGCGTGAA TTTCGGCAAC GTGCGCCGTC AGGGACGGTT TCTCGGCCAA CTGGAACTGT CCAATCGCTC CTGGGCACTG TGGAAGCGCC TGCCGGAGCT GATCGGCGAA GACCTGGAAT TCATTCCCAG CGGGCACATG CGCGTTTGCT ATCGCGAAGA CGAAATCGCC GAACTGGAAG CCTATGCCGC CGCCCCGGAA GCCCGCGAGC TGGACTTGCA GATCCTTTCC GGCAAGGCGC TGCACGACCG TTTTCCGTTT CTCGGTACAC AAGTCAAAGG CGGTTCCTAT GCGCCCCATG ACGGGCACGC CAACCCAAGG CTGGCAGCCC CCGCGTTCGC CCGTGCGGCG ATTCGTGCAG GTGCAAGAAT CGAAGAACGC ACTGAAGTGA CCGAGGTGCA AAAGGTGGGC GGCGAGTTTC AGGTCACCAC CGCCGATGGA CAGCTATTCG TCGCCGAACA GTTGCTCATC ACTGCCGGTG CCTGGGGCGC CAGGCTCGCC GAGCAGTTCG GCGAGTCTGT CCCTCTTGAG CCCAACGGAC CGCAGATGTC GGTGACAGAA CCGGTGCCTT ACGCGCTGCC GACGGTGATC GGGGTGTTTA CCAGGATCAA GGAAGAAGTG ATCTATTTCC GGCAGATCCC GCGCGGCAAC ATCATCATCG GGGGTGGCAA TCGCAATAAG CCGGACATGC TCAACCGCCG CGCCTACTTC AAGCCGGAGA GCCTGATCAA CCAGATGAAA CAGATGAAAC GCCTGCTACC GGGCGCAGAA AAGCTGAACA TCATCCGCGT CTGGAGCGGC ATCGAGAGTT ACACGCCGGA CTCGCTACCG ATCATGGGCC GCAGCGGCAA GGTCGACGGC CTGTTCTATG CGTTTGGCTT CTGCGGCCAT GGTTTTCAGC TTGGTCCCGG CGTCGGTGAC GTCATGGCCG AGCTGATCAG CACCGGCAGC ACGCGCACGT TGATCAGCCC GTTCGATATT CGCCGCTTCA CCGATCCGAC CGCCATCGAA ATGCCGCTCA TGTCCAGCCT GATGAGCACC GGAAAGCTGG TATGA
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Protein sequence | MTPQKSDVLI IGGGFMGASS AFFLRQHGRS VTLLERDQIG QYASGVNFGN VRRQGRFLGQ LELSNRSWAL WKRLPELIGE DLEFIPSGHM RVCYREDEIA ELEAYAAAPE ARELDLQILS GKALHDRFPF LGTQVKGGSY APHDGHANPR LAAPAFARAA IRAGARIEER TEVTEVQKVG GEFQVTTADG QLFVAEQLLI TAGAWGARLA EQFGESVPLE PNGPQMSVTE PVPYALPTVI GVFTRIKEEV IYFRQIPRGN IIIGGGNRNK PDMLNRRAYF KPESLINQMK QMKRLLPGAE KLNIIRVWSG IESYTPDSLP IMGRSGKVDG LFYAFGFCGH GFQLGPGVGD VMAELISTGS TRTLISPFDI RRFTDPTAIE MPLMSSLMST GKLV
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