Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3383 |
Symbol | |
ID | 3368910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4042927 |
End bp | 4043952 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653734 |
Product | extracellular solute-binding protein |
Protein accession | YP_236453 |
Protein GI | 66046612 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0659293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTTC ATCTCAAGGA CCTTGCAGTG ATTAAACTCT TCGCCGCCTC GCTACTGGCC GCCGGCCTGG CTTTTGCCAA CGCTGCCCAG GCAGCTCCGC CGCTGCTCAA CGTCTCCTAT GACGTGATGC GTGATTTCTA CAAGGACTAC AACAGCGCCT TCCAGAAGCA CTGGAAAGCC GAGAAGAATG AAGAGGTGAC CGTGCAGATG TCCTTCGGCG GGTCGAGCAA GCAAGCGCGT TCGGTCATCG ACGGGCTGCC GGCTGACGTG ATCACCATGA ACATGGCCAC TGACATCAAC GCCCTGGCCG ACAATGGCAA GCTGGTGCCG GAAGACTGGG TCAGCCGCCT GCCAAACAAC AGCGCGCCCT TCACCTCGGC CACGGTGTTC ATCGTGCGCA AAGGCAACCC GAAGGCGATC AAAGACTGGC CGGACCTGAT CAAGGATGGC GTCGAAGTCA TCGTGCCCAA CCCGAAAACC TCGGGCAACG GCCGCTACAC CTACCTGTCG GCCTGGGGCT ACACCCTGAA AAAAGGCGGC GATGAAGCGG CGGCGAAGAA ATTCGTCGGT GATCTGTTCA GCCATGTGCC AGTGCTTGAT ACCGGCGGCC GTGGTGCGAC CACTACGTTC ATGACCAACC AGATCGGCGA CGTGCTGGTC ACCTTCGAGA ACGAAGCGGA AATGATCGCC CGTGAATTCG GTCGCGACCA GTTCGAAGTG GTCTACCCGT CCGTGTCGGC AGAAGCCGAG CCACCGGTCA GTGAGGTCGA CAAGGTCGTG GACAGGAAAG GATCCCGCCC CCTGGCTGAG GAATACCTGA AATACCTGTG GTCACCGGAA GGCCAGGAAA TCGCGGCCAA AAACTACCTG CGCCCGCGTG ACCCGCAGGT GCTGGCCAAG TATACGGATC GCTTCCCGAA AGTGGACTTC CTCTCGGTGG AGAAAACCTT CGGTGACTGG CGCACAGTGC AGAAGACCCA CTTCATCGAC GGCGGTGTGT TCGACCAGAT CTATCCGGGC AAATAA
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Protein sequence | MTLHLKDLAV IKLFAASLLA AGLAFANAAQ AAPPLLNVSY DVMRDFYKDY NSAFQKHWKA EKNEEVTVQM SFGGSSKQAR SVIDGLPADV ITMNMATDIN ALADNGKLVP EDWVSRLPNN SAPFTSATVF IVRKGNPKAI KDWPDLIKDG VEVIVPNPKT SGNGRYTYLS AWGYTLKKGG DEAAAKKFVG DLFSHVPVLD TGGRGATTTF MTNQIGDVLV TFENEAEMIA REFGRDQFEV VYPSVSAEAE PPVSEVDKVV DRKGSRPLAE EYLKYLWSPE GQEIAAKNYL RPRDPQVLAK YTDRFPKVDF LSVEKTFGDW RTVQKTHFID GGVFDQIYPG K
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