| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3382 |
|---|
| Symbol | |
|---|
| ID | 3368909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4042017 |
|---|
| End bp | 4042850 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637653733 |
|---|
| Product | Ion transport protein |
|---|
| Protein accession | YP_236452 |
|---|
| Protein GI | 66046611 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0078085 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCT CTCTCAGCCG CCGCGAGCGG CTGCATATTG TTATTTTCGA GGCCAATACG
CCTGCCGGGC GGATGTTTGA CAAGGCGGTG CTGGTCGCGA TTCTGCTCAG TCTGCTGGTC
ACTATCATCG ACAGCATCGA GAGTATTCAT CGTGATTACG CGATGCTTTT CGCGTGGATC
GAATGGGGCT TCACGCTGAT GTTTGCCATC GAATACATGC TGCGCCTCTA TTGCTCGCCA
CGGCCGCTGA AGTACGCCTT CAGTTTCTAC GGGTTGGTGG ACCTGCTGGC GATCGTGCCG
GGCGTGCTGT CGATCTATTA CAGCGATGCG CAATACCTGC TGATCGTGCG GATCATCCGT
ATGCTGCGGA TCTTCAGGGT GCTCAAGCTC GGCACCTACC TGCGCCAGGC CAATTACCTG
CTGGCGGCGC TGCGTGGCAG CAAGCAGAAG ATCATCGTGT TTCTGGTCAC GGTGTCTACG
CTGGTCACGG TGTTCGGCAC ACTGATGTAT GTGATCGAAG GTCCGGAGCA TGGTTTCACC
AGCATTCCCA AGGGCATTTA CTGGGCCATC GTGACCCTGA CGACGGTGGG CTTTGGCGAT
ATAGTGCCCA AGACCCCGCT CGGCCAGATG CTCTCCTCGC TGGTGATGAT CACCGGTTAC
TCGATCATCG CCGTGCCCAC CGGGATATTC ACCGCCGAGC TGGCCAACGC CATGCGCGGC
GAGCAGCTGA AACACGATTG TCCGGTGTGC TCGAAAAACC TTCACGAGCA TGGCGCGGCG
TTCTGCTCAC GCTGCGGCAA TCAATTGTTT ACAAAAACAG AGCACAAGGC ATAA
|
|---|
| Protein sequence | MDSSLSRRER LHIVIFEANT PAGRMFDKAV LVAILLSLLV TIIDSIESIH RDYAMLFAWI
EWGFTLMFAI EYMLRLYCSP RPLKYAFSFY GLVDLLAIVP GVLSIYYSDA QYLLIVRIIR
MLRIFRVLKL GTYLRQANYL LAALRGSKQK IIVFLVTVST LVTVFGTLMY VIEGPEHGFT
SIPKGIYWAI VTLTTVGFGD IVPKTPLGQM LSSLVMITGY SIIAVPTGIF TAELANAMRG
EQLKHDCPVC SKNLHEHGAA FCSRCGNQLF TKTEHKA
|
|---|
| |