Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3378 |
Symbol | |
ID | 3368905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4036675 |
End bp | 4038762 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653729 |
Product | fusaric acid resistance protein region |
Protein accession | YP_236448 |
Protein GI | 66046607 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.926577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGGAT TTTTCTCCAG CGTTCCACCT GCACGCGACT GGTTCTACGG TGTGCGCACC TTCGGCGCAT CAATGCTGGC GCTGTACATC GCATTGTTGA TGGAAATGCC CCGCCCCTAC TGGGCAATGG CCACGGTGTA CATCGTCTCC AGCCCCTTCG TCGGCCCGAC CAGCTCCAAG GCCCTGTACA GAGCCGCCGG AACCCTGGCC GGTGCCGCAG CATCGGTGGT GCTGGTGCCC ATGTTCGTGC AGACGCCCTT GTTGCTGGCC ATCGTGGTCG GGCTGTGGAC GGGCACCCTG TTGTTTCTGT CCCTGCACTT GCGCACCGCC AACAGCTACG CATTGATGCT GGCCGGCTAC ACCATGCCGC TGATTTCGCT GCCGGTGGTC GACAACCCGC AGGCTGTTTT CGACATCGCG GTGTCGCGTA CCGAAGAGAT TTTTCTCGGC ATCATCTGCG CCGCTGTCGT GGGTGCGATG TTCTGGCCCA GACGCCTGGC ACCGGTGTTT CAGGCCACCA CGGAAAAGTG GTTCAGTGAC GCCGCGACTT ACAGTCAGCG CTTTATCAGC CGCACCTGTC AGCCCGAAGA AATCGGCACA CTGCGAAATT CGATGGTCGG CAGCTTCAAC TCGCTGGAAA TGATGATCGG CCAGTTGAGC CACGAAGGCG CCCGCAAGCA AACCGTGCGC AATGCCAATG AACTGCGCGG CCGGATGATC CACCTCTTGC CGGTCATTGA TGCGCTGGAT GACGCGCTGT GGGCGCTGGA GCGACGCACA CCCGAGCTGC TGGCCAGCGT CAGACCCTTA TTGCACAAGA CTTGCGACTG GCTCGAAAGC ACTGCCGACG GGCCGCAGGT GGAGCAATGG CAGCAGCTGC ATCGTGATCT GCAGAGCCTG CAACCGGACT CCGCGCAACT GGACGATCGC GATCAACTGC TGCTCTCCAA TACGCTGTTC AGGCTGGGCG AATGGATCGA CCTGTGGCTG GATTGCCGAA CCCTGCAATA CGCGATCAAG ACCGACGACC AGTCACAGTG GCGCGCGGTC TACCGCCACT GGCGCCTGGG CCGGCTTACC CCGTTTCTCG ACCGCGGTCT GATGCTCTAT TCGGTGACCT CGACAGTACT GGCGATCATC GCCGCGTCGG TGTTGTGGAT TCTGCTCGGC TGGAAAGACG GCGCAAGTGC CGTGGCACTG GCGGCGGTGT CGTGCAGCTT CTTCGCCGCC ATGGACGACC CTGCTCCGCA AATCTACCGG TTCTTTTTCT GGACCCTGCT CTCGGTGGTG TTCGCCAGCC TGTACCTGTT TGTGGTGCTG CCCAACCTGC ATGACTTCCC GATGCTGGTG CTGGCCTTTG CCGTGCCGTT CATTTGCGTC GGCACCCTGA CCGTGCAGCC GCGCTTCTTT CTCGGCACGC TGCTGACCAT CGTCAACACC TCGTCGTTCA TCAGTATCCA GAGCGCTTAT GACGCGGACT TCATGAACTT CCTCAACGCC AACCTGGCGG GTCCTGTCGG ACTGCTGTTC GCCTTCATCT GGACCCTGGT GTTCCGCCCG TTCGGCGTCG AACTGGCGGT CAAGCGCCTG ACCCGGTTCA GCTGGCGTGA CATCGCCAGT CTCAGTGAAA ACGCGTCTCT GGCCGAGCAT CGGCGCATGG GCGTGCAAAT GCTCGACCGC CTGATGCAAC AACTGCCGCG CCTGACGCTC ACCGCCCAGG ACACCGGGAT TGCCCTGCGT GAACTGCGCG TCGCGCTGAA CATGCTCGAC CTGCTGGCCT ACACCCGCCG TGCCACGCCT GCGGCTCAGG TGCTGTTGCG TCAGGTGATC GACGAAGTCA GCGGCTATTT CAAACTGTGC CGCAAGGCCG GTGAACGGCT ACCCGCGCCC AGAGGCCTGC TGATGGCCAT GGACCGCGCA CGCCGTTCAC TGACCGATCA GGAGATGGGC GACAACCCGG CCCGACTGCA CCTTCTGCAT GCCCTGAGTG GCCTGCGCCT GGCTCTGCTC CCGGGGGTCG AGATCGTCAC CGTGGGCGGG GAACTGACCG AGCAACTGCC GCATAACATC GATGGAGCGC CCCTGTGA
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Protein sequence | MNGFFSSVPP ARDWFYGVRT FGASMLALYI ALLMEMPRPY WAMATVYIVS SPFVGPTSSK ALYRAAGTLA GAAASVVLVP MFVQTPLLLA IVVGLWTGTL LFLSLHLRTA NSYALMLAGY TMPLISLPVV DNPQAVFDIA VSRTEEIFLG IICAAVVGAM FWPRRLAPVF QATTEKWFSD AATYSQRFIS RTCQPEEIGT LRNSMVGSFN SLEMMIGQLS HEGARKQTVR NANELRGRMI HLLPVIDALD DALWALERRT PELLASVRPL LHKTCDWLES TADGPQVEQW QQLHRDLQSL QPDSAQLDDR DQLLLSNTLF RLGEWIDLWL DCRTLQYAIK TDDQSQWRAV YRHWRLGRLT PFLDRGLMLY SVTSTVLAII AASVLWILLG WKDGASAVAL AAVSCSFFAA MDDPAPQIYR FFFWTLLSVV FASLYLFVVL PNLHDFPMLV LAFAVPFICV GTLTVQPRFF LGTLLTIVNT SSFISIQSAY DADFMNFLNA NLAGPVGLLF AFIWTLVFRP FGVELAVKRL TRFSWRDIAS LSENASLAEH RRMGVQMLDR LMQQLPRLTL TAQDTGIALR ELRVALNMLD LLAYTRRATP AAQVLLRQVI DEVSGYFKLC RKAGERLPAP RGLLMAMDRA RRSLTDQEMG DNPARLHLLH ALSGLRLALL PGVEIVTVGG ELTEQLPHNI DGAPL
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