Gene Psyr_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3378 
Symbol 
ID3368905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4036675 
End bp4038762 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content62% 
IMG OID637653729 
Productfusaric acid resistance protein region 
Protein accessionYP_236448 
Protein GI66046607 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.926577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGGAT TTTTCTCCAG CGTTCCACCT GCACGCGACT GGTTCTACGG TGTGCGCACC 
TTCGGCGCAT CAATGCTGGC GCTGTACATC GCATTGTTGA TGGAAATGCC CCGCCCCTAC
TGGGCAATGG CCACGGTGTA CATCGTCTCC AGCCCCTTCG TCGGCCCGAC CAGCTCCAAG
GCCCTGTACA GAGCCGCCGG AACCCTGGCC GGTGCCGCAG CATCGGTGGT GCTGGTGCCC
ATGTTCGTGC AGACGCCCTT GTTGCTGGCC ATCGTGGTCG GGCTGTGGAC GGGCACCCTG
TTGTTTCTGT CCCTGCACTT GCGCACCGCC AACAGCTACG CATTGATGCT GGCCGGCTAC
ACCATGCCGC TGATTTCGCT GCCGGTGGTC GACAACCCGC AGGCTGTTTT CGACATCGCG
GTGTCGCGTA CCGAAGAGAT TTTTCTCGGC ATCATCTGCG CCGCTGTCGT GGGTGCGATG
TTCTGGCCCA GACGCCTGGC ACCGGTGTTT CAGGCCACCA CGGAAAAGTG GTTCAGTGAC
GCCGCGACTT ACAGTCAGCG CTTTATCAGC CGCACCTGTC AGCCCGAAGA AATCGGCACA
CTGCGAAATT CGATGGTCGG CAGCTTCAAC TCGCTGGAAA TGATGATCGG CCAGTTGAGC
CACGAAGGCG CCCGCAAGCA AACCGTGCGC AATGCCAATG AACTGCGCGG CCGGATGATC
CACCTCTTGC CGGTCATTGA TGCGCTGGAT GACGCGCTGT GGGCGCTGGA GCGACGCACA
CCCGAGCTGC TGGCCAGCGT CAGACCCTTA TTGCACAAGA CTTGCGACTG GCTCGAAAGC
ACTGCCGACG GGCCGCAGGT GGAGCAATGG CAGCAGCTGC ATCGTGATCT GCAGAGCCTG
CAACCGGACT CCGCGCAACT GGACGATCGC GATCAACTGC TGCTCTCCAA TACGCTGTTC
AGGCTGGGCG AATGGATCGA CCTGTGGCTG GATTGCCGAA CCCTGCAATA CGCGATCAAG
ACCGACGACC AGTCACAGTG GCGCGCGGTC TACCGCCACT GGCGCCTGGG CCGGCTTACC
CCGTTTCTCG ACCGCGGTCT GATGCTCTAT TCGGTGACCT CGACAGTACT GGCGATCATC
GCCGCGTCGG TGTTGTGGAT TCTGCTCGGC TGGAAAGACG GCGCAAGTGC CGTGGCACTG
GCGGCGGTGT CGTGCAGCTT CTTCGCCGCC ATGGACGACC CTGCTCCGCA AATCTACCGG
TTCTTTTTCT GGACCCTGCT CTCGGTGGTG TTCGCCAGCC TGTACCTGTT TGTGGTGCTG
CCCAACCTGC ATGACTTCCC GATGCTGGTG CTGGCCTTTG CCGTGCCGTT CATTTGCGTC
GGCACCCTGA CCGTGCAGCC GCGCTTCTTT CTCGGCACGC TGCTGACCAT CGTCAACACC
TCGTCGTTCA TCAGTATCCA GAGCGCTTAT GACGCGGACT TCATGAACTT CCTCAACGCC
AACCTGGCGG GTCCTGTCGG ACTGCTGTTC GCCTTCATCT GGACCCTGGT GTTCCGCCCG
TTCGGCGTCG AACTGGCGGT CAAGCGCCTG ACCCGGTTCA GCTGGCGTGA CATCGCCAGT
CTCAGTGAAA ACGCGTCTCT GGCCGAGCAT CGGCGCATGG GCGTGCAAAT GCTCGACCGC
CTGATGCAAC AACTGCCGCG CCTGACGCTC ACCGCCCAGG ACACCGGGAT TGCCCTGCGT
GAACTGCGCG TCGCGCTGAA CATGCTCGAC CTGCTGGCCT ACACCCGCCG TGCCACGCCT
GCGGCTCAGG TGCTGTTGCG TCAGGTGATC GACGAAGTCA GCGGCTATTT CAAACTGTGC
CGCAAGGCCG GTGAACGGCT ACCCGCGCCC AGAGGCCTGC TGATGGCCAT GGACCGCGCA
CGCCGTTCAC TGACCGATCA GGAGATGGGC GACAACCCGG CCCGACTGCA CCTTCTGCAT
GCCCTGAGTG GCCTGCGCCT GGCTCTGCTC CCGGGGGTCG AGATCGTCAC CGTGGGCGGG
GAACTGACCG AGCAACTGCC GCATAACATC GATGGAGCGC CCCTGTGA
 
Protein sequence
MNGFFSSVPP ARDWFYGVRT FGASMLALYI ALLMEMPRPY WAMATVYIVS SPFVGPTSSK 
ALYRAAGTLA GAAASVVLVP MFVQTPLLLA IVVGLWTGTL LFLSLHLRTA NSYALMLAGY
TMPLISLPVV DNPQAVFDIA VSRTEEIFLG IICAAVVGAM FWPRRLAPVF QATTEKWFSD
AATYSQRFIS RTCQPEEIGT LRNSMVGSFN SLEMMIGQLS HEGARKQTVR NANELRGRMI
HLLPVIDALD DALWALERRT PELLASVRPL LHKTCDWLES TADGPQVEQW QQLHRDLQSL
QPDSAQLDDR DQLLLSNTLF RLGEWIDLWL DCRTLQYAIK TDDQSQWRAV YRHWRLGRLT
PFLDRGLMLY SVTSTVLAII AASVLWILLG WKDGASAVAL AAVSCSFFAA MDDPAPQIYR
FFFWTLLSVV FASLYLFVVL PNLHDFPMLV LAFAVPFICV GTLTVQPRFF LGTLLTIVNT
SSFISIQSAY DADFMNFLNA NLAGPVGLLF AFIWTLVFRP FGVELAVKRL TRFSWRDIAS
LSENASLAEH RRMGVQMLDR LMQQLPRLTL TAQDTGIALR ELRVALNMLD LLAYTRRATP
AAQVLLRQVI DEVSGYFKLC RKAGERLPAP RGLLMAMDRA RRSLTDQEMG DNPARLHLLH
ALSGLRLALL PGVEIVTVGG ELTEQLPHNI DGAPL