Gene Psyr_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3375 
Symbol 
ID3368902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4033610 
End bp4034998 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content63% 
IMG OID637653726 
Productheavy metal sensor kinase 
Protein accessionYP_236445 
Protein GI66046604 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCC AGCCTTCCCT GACCCTGCGC TCGACCCTGG CCTTTGCCCT GGTGGCGATG 
CTCACCGTCA GCGGCGCAGG CCTGTACCTG TATCAGTCAA TCGAAGAAAC GGTCATGCAG
CGCAGCGACC ATGCCGTGCT CGCGCGGCTG GACCACTTTC GCAAGCTGTT GCGCTATGAC
CTGACCATGG GCAACCTCAA GGGCAGCCCG CAGCTGTTCG AGAACATGCT CGACAGCGAA
GAAGACATCT TCATCATCGG CGAGCCGGGC AAGTCACCGG TCATCTCGGT CAATCCGCAG
CACGCGCCCC TGCCGGAGCT GCCGACCGTG GCGCAGGACC AACCGCTGCG GGTCGATGAC
CTGCGCAGCG GCATGAGCCT GCAAGGCGTG CCGTTGCGCG CTGCCGCCGT CCAGGTGATG
TCCAACGGTG TCGAAGTGCG CTTGCAGGCT GCGCACCTGA TGGTCAAGGA AATGGCCATG
CTCGCCAGTT TCCGTCAGCG TATCTATATA GCTGTGGCCC TGGCGTTTCT GATCACCGCA
GCCCTGGGTT ATGTGCTGCT GCGCCGCGGC TTGCGTCCAC TGCGCAGAAT GGCCGCCCAC
GCTGCCGCCA TCACCCCGGC CAGCCTGCAC AAACGCCTCG ACAGCCGCGA TACACCCGTC
GAGCTGCAAC AACTGAGCGA TGCCTTCAAC GCCATGCTTG ACCGTCTGGA CGATGGCTAC
CGGCGCCTGA TGCAGTTTTC TGCCGATCTG GCCCATGAAA TCCGCACACC GGTCGGCTCA
CTGATGGGCC ATTGTCAGGT CGCCTTGCGC CAGAACCGCA GCGCCGATGA ATATCAGGCG
CTGCTGGCCT CCAATCTGGA AGAGCTGGAA CGCATCTCGC GGCTGGTGGA AAGCATTCTG
TTTCTGGCAC GGGCGGACGA AGCCCAGGCC GCGCTGGAAC GTCAGGCGCT GGATATGCAT
GACGAACTGC AACGGGTCGC CGGCTATTTC GAGGGGCTGG CCGAAGAACG CAACCTGACC
CTGAGCACCC ACGGACAAGG CACGCTGCTG GCCGATCCGA TTTTGCTGCG GCGTGCATTG
AGCAATCTGG TCGCCAATGC GATTCGCTAC GCTGATGAAG ACAGCGAGAT TCTGATGCGA
GTGACGGCTG TGGACAGGCA CTGGAAGATC GATGTGGAGA ATCAGGGACC GGTGCTGCCG
GAGGCCACCC TCGCACGCTT GTTCGATCGT TTCTATCGCG GTGACGCCTC ACGCCATGAG
CGCTCGGATT CCAACGGCCT GGGGCTGGCG ATCGTCACGG CAATCATGCA ACTGCACGGC
GGTCGGGTCG AAGTCGCTCA ACCCGCCGTC GGCAGAATCT GCTTCAGTCT GATATTCCCA
GCGGCCTGA
 
Protein sequence
MRRQPSLTLR STLAFALVAM LTVSGAGLYL YQSIEETVMQ RSDHAVLARL DHFRKLLRYD 
LTMGNLKGSP QLFENMLDSE EDIFIIGEPG KSPVISVNPQ HAPLPELPTV AQDQPLRVDD
LRSGMSLQGV PLRAAAVQVM SNGVEVRLQA AHLMVKEMAM LASFRQRIYI AVALAFLITA
ALGYVLLRRG LRPLRRMAAH AAAITPASLH KRLDSRDTPV ELQQLSDAFN AMLDRLDDGY
RRLMQFSADL AHEIRTPVGS LMGHCQVALR QNRSADEYQA LLASNLEELE RISRLVESIL
FLARADEAQA ALERQALDMH DELQRVAGYF EGLAEERNLT LSTHGQGTLL ADPILLRRAL
SNLVANAIRY ADEDSEILMR VTAVDRHWKI DVENQGPVLP EATLARLFDR FYRGDASRHE
RSDSNGLGLA IVTAIMQLHG GRVEVAQPAV GRICFSLIFP AA