Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3370 |
Symbol | |
ID | 3368897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4029281 |
End bp | 4030138 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653721 |
Product | hypothetical protein |
Protein accession | YP_236440 |
Protein GI | 66046599 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2822] Predicted periplasmic lipoprotein involved in iron transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0182189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTATC CACTCCTGAC CCGGAAGACA CTCATGAAAA AGACGCCCCT GGCTTTGCTC CTGACCCTTG GCCTGCTCCA GACCCCACTG GCGGCCTTTG CCGCCACCGC GCCGCTGGAT CTGGTAGGCC CGGTGTCGGA CTACAAGATC TACGTGACCG AGAACATTGA AGAGCTGGTC AGCCACACCC AGAAATTCAC CGATGCCGTG AAGAAAGGCG ACATCGCGAC AGCCAAAAAG CTCTACGCCC CTACCCGCGT GTACTACGAG TCGGTAGAAC CGATTGCCGA ACTGTTCAGT GACCTGGACG CCTCCATCGA CTCACGCGTC GACGACCATG AACAAGGCGT GGCGGCGGAA GACTTCACTG GCTTCCATCG TCTGGAATAT GCGCTGTTCT CGCAGAACAC CACGAAGGAT CAGGGCCCTA TCGCCGACAA GCTGTTGAGC GACGTCAAGG ACCTGGAAAA GCGCGTGGCC GACCTGACCT TCCCGCCTGA AAAAGTCGTC GGCGGCGCAG CAGCCCTGCT GGAAGAAGTG GCAGCGACCA AGATCTCCGG CGAAGAAGAC CGCTACAGCC ACACCGACCT GTATGACTTC CAGGGCAACA TCGACGGCGC GAAAAAAATC GTCGACCTGT TCCGTCCGCA GATCGAACAG CAGGACAAGG CCTTTTCCAG CAAAGTCGAC AAGAACTTCG CCACCGTGGA CAAGATCCTC GCCAAGTACA AGACCAAGGA CGGTGGCTTT GAAACCTACG ACAAAGTCAA AGAAAACGAT CGCAAAGCCC TGGTCGGCCC GGTCAACACC CTGGCAGAAG ACCTCTCGAC CCTGCGCGGC AAGCTGGGCC TGAACTGA
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Protein sequence | MTYPLLTRKT LMKKTPLALL LTLGLLQTPL AAFAATAPLD LVGPVSDYKI YVTENIEELV SHTQKFTDAV KKGDIATAKK LYAPTRVYYE SVEPIAELFS DLDASIDSRV DDHEQGVAAE DFTGFHRLEY ALFSQNTTKD QGPIADKLLS DVKDLEKRVA DLTFPPEKVV GGAAALLEEV AATKISGEED RYSHTDLYDF QGNIDGAKKI VDLFRPQIEQ QDKAFSSKVD KNFATVDKIL AKYKTKDGGF ETYDKVKEND RKALVGPVNT LAEDLSTLRG KLGLN
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