| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3369 |
|---|
| Symbol | |
|---|
| ID | 3368896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4027962 |
|---|
| End bp | 4029284 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637653720 |
|---|
| Product | twin-arginine translocation pathway signal:Tat-translocated enzyme:Dyp-type peroxidase |
|---|
| Protein accession | YP_236439 |
|---|
| Protein GI | 66046598 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01412] Tat-translocated enzyme
[TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0100762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC CGGACAGCAA TCCAGACACA AGCAACGCTC CGGCCTCCCT GCAACGCCGC
CGCGTGCTGA TGGGGCTTGG CGCTGCAGGG GCCGCGCTGG CTGGCAGCAG CCTGAGCGGC
AACGTACTTG CCGCAGCGCC TGCACAAGTC GCCGAAGCGC CAAACAGTGA AAAAACGCAG
GATCACAACG AGTTTTACGG TCAGCACCAG AGCGGCATCG TCAACCCGCG CCCGGCCGCG
GGCATGCTGG TGGCGTTCGA TGTTCTGGCC GCCGACCGTG AGGACCTGGA ACGCCTGTTT
CGCACGCTGA ACGAGCGCAT CGCGTTCCTG ATGACCGGTG GCCCGGTGCC GGAGATCGAT
CCGAAACTGC CACCGCCGGA CTCGGGCATT CTCGGCCCGG TGGTGACCCC GGACAACCTG
ACCATCACCG TGTCGGTGGG CGAGTCGCTG TTCGATGAGC GTTTCGGCCT GGCCCCGATC
AAGCCGAAAC GCCTGAGCCG GATGACCGGT TTCCCCAACG ATGCGCTGGA TCCGGCCAGT
TGCCACGGCG ATCTGAGCAT CCAGTTCTGC GCCAACACCG CCGACAGCAA CATCCATGCG
CTGCGCGACA TCGTCAAGAA CCTGCCCGAT CTGCTGCTGG TGCGCTGGAA ACAGGAAGGC
ACCGTGCCGC CCCAGGCACC GAAGAAACCC GGTCAGCCAC CAGAAAGCGC GCGCAACTTC
CTGGGTTTCC GGGATGGTTC GGCGAACCCG GATTCCAACA ACCAGAAGAC CATGAACGAG
CTGGTCTGGG TGCAACCGGG CAGCGACGAA CCGGCCTGGG CCGCCAATGG CAGCTATCAG
GCGGTGCGCA TCATCCGCAA CTTCGTCGAG CGTTGGGACC GCACGCCGTT GCAGGAGCAG
GAATCGATTT TCGGTCGCAG CAAAAGCACC GGCGCGCCCA TGGACGGCAA GGTCGAGAGC
GATGTGCCCA ACTACGCGGC AGACCCGGAA GGCAAGAAAA CCCGGCTGGA TTCGCACATC
CGCCTGGCCA ACCCGCGTAC CGCCGAAAGC CAGCGCAACC TGATCCTGCG TCGTCCGTTC
AATTACTCCA ACGGGGTGAA CAAGAACGGG CAACTGGACA TGGGCCTGCT GTTCATCTGC
TACCAGGCCG ATCTGGAAAA GGGCTTCATT ACGGTACAGA GCCGGCTTAA CGGCGAGCCG
CTGGAGGAAT ACCTCAAACC GGTCGGTGGC GGCTATTTCT TCACCCTGCC GGGGGTAACC
GGCGACCAGG ATTTCATCGG TCGCTCGCTG CTGGCGGCCG TAGCGCCCAC TAAAAACGCA
TGA
|
|---|
| Protein sequence | MKNPDSNPDT SNAPASLQRR RVLMGLGAAG AALAGSSLSG NVLAAAPAQV AEAPNSEKTQ
DHNEFYGQHQ SGIVNPRPAA GMLVAFDVLA ADREDLERLF RTLNERIAFL MTGGPVPEID
PKLPPPDSGI LGPVVTPDNL TITVSVGESL FDERFGLAPI KPKRLSRMTG FPNDALDPAS
CHGDLSIQFC ANTADSNIHA LRDIVKNLPD LLLVRWKQEG TVPPQAPKKP GQPPESARNF
LGFRDGSANP DSNNQKTMNE LVWVQPGSDE PAWAANGSYQ AVRIIRNFVE RWDRTPLQEQ
ESIFGRSKST GAPMDGKVES DVPNYAADPE GKKTRLDSHI RLANPRTAES QRNLILRRPF
NYSNGVNKNG QLDMGLLFIC YQADLEKGFI TVQSRLNGEP LEEYLKPVGG GYFFTLPGVT
GDQDFIGRSL LAAVAPTKNA
|
|---|
| |