| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3367 |
|---|
| Symbol | |
|---|
| ID | 3368894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4025868 |
|---|
| End bp | 4026722 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653718 |
|---|
| Product | Iron permease FTR1 |
|---|
| Protein accession | YP_236437 |
|---|
| Protein GI | 66046596 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
|---|
| TIGRFAM ID | [TIGR00145] FTR1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.226405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTTC CCTTTTTGAT CATGCTGCGC GAAGGCATCG AAGCCGCACT TATCGTTGGC
ATTATCGCCA GTTACCTGAA GCAGACCGGC CGTGGCGAGT GGATGCCTGC GGTGTGGATC
GGCGTATTTC TGGCTGTCGC GCTCTCGCTG TTCGTCGGTG GCGGGCTTGA GTTGATGAGC
GCCGAGTTTC CGCAGAAGCA GCAGGAACTG TTCGAAGGCA TCGTCGGCCT GATCGCCGTT
GGCATTCTCA GTTCCATGGT GTTCTGGATG CGCAAGGTGG CACGATCGAT CAAACACGCG
CTGCACGAAT CGCTGGACGC AGCCCTCACC GGCTCGAAAA ACCAGACCTA CGCGCTGATC
GCCATGGTGT TTTTCGCCGT GGCCCGCGAA GGGCTGGAAA CCGTATTCTT TCTGCTCGCT
GTGTTCCAGC AGAGCGAAGG CTCCGGCGCG CCGTTGGGCG CCCTGCTCGG TCTGTTGCTG
GCGGTCGGTT TCGGCGTGGC CATCTACAGC GGCAGCATGC GTCTCAACCT GAGCCTGTTT
TTCCGCTGGA CCGGGCTGTT CATTCTGGTA GTGGCGGCGG GCATTCTCGC CAACTCCGTT
CAGGCACTGC ATGAAGCCGG GGTCTGGAAT CACCTGCAGG AAGTGGTCTT CGACATCAGT
GCACGGTTGC CGATGGACGG CCCTGCCGGT TCGGTGCTGG CAGGCATGTT CGGTTACCAG
GACGCGCCGA CGGTCAGCAC TCTGAGTGCC TACCTGATTT ACCTGATCGG GGCGCTGCTG
CTGTTCTTCA AGCCGCACAC CCCGACCGCT GGCAAGGTCA TGCAGCCAAA CACCTCTTCT
GTTACGAACG AATAA
|
|---|
| Protein sequence | MLVPFLIMLR EGIEAALIVG IIASYLKQTG RGEWMPAVWI GVFLAVALSL FVGGGLELMS
AEFPQKQQEL FEGIVGLIAV GILSSMVFWM RKVARSIKHA LHESLDAALT GSKNQTYALI
AMVFFAVARE GLETVFFLLA VFQQSEGSGA PLGALLGLLL AVGFGVAIYS GSMRLNLSLF
FRWTGLFILV VAAGILANSV QALHEAGVWN HLQEVVFDIS ARLPMDGPAG SVLAGMFGYQ
DAPTVSTLSA YLIYLIGALL LFFKPHTPTA GKVMQPNTSS VTNE
|
|---|
| |