Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3362 |
Symbol | |
ID | 3368889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4019832 |
End bp | 4020947 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653713 |
Product | AFG1-like ATPase |
Protein accession | YP_236432 |
Protein GI | 66046591 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.140427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCG TCTCTCCTCT GCAAGCCTAC GAACGTGCCG TCCAGCGGGG TTTTCAACCC GATCAGGCGC AGTTGCAGGC TGCCCGGCAG TTGCAGGCGT GTTACGAGGG GCTTGCCGAC GCTCGCGGTC GGGCACGCGG CGTTTATCTG TGGGGACCGG TCGGGCGTGG CAAGACCTGG TTGATGGACC GCTTTTTCGA GAGCCTGAGC GTACCGGCCC GGCGTCAGCA TTTTCATCAC TTCATGCGCT GGGTGCACAA ACGCATGTTC GAGTTGATGG GTACATCCCA GCCGCTGACT GTGGTCGCCA GGGAGCTGGC GCGTGACGTG CGGGTGATGT GTTTCGACGA GCTGTTCGTC ACCGATATCG GCGATGCAGT GATCCTCGGC GGGCTGCTGC AGGTGATGTT CGAAGAGGGC GTGGTGCTGG TCTGCACGTC CAACCAGCCA CCGGAGCAGT TATACAGCCA TGGCCATAAT CGCGAGCGCT TCCTGCCAGC GGTTGCGGCC ATTCTCAAGT ACATGGATGT CGTGGCCGTC GACGGCGGCG AGGATCACCG GCTGCACCCC GGGCAACTGC ATCAGCGTTA CTGGATTGCC GAAGCCGGTC GACCCAGCGC CTTGCAGGGC ATCTTCGACG CGTTGAGCGC GGATCAGCCG GTTCACGATT CGCAGGTCAT GCTCGGTTAT CGCAGCATCA ACGTGGTTCA GCATTCCGAC ACGGCCGTGT GGTGCCGCTA TCGCGACCTT TGCGAACAGC CGCTGGCGGC CATGGATTTC ATCGCCTTGT GCGATCGCTT TTCGGTGATT CTGCTCAGCG AGGTGCCGCT GCTGGGGGCC GCGCAGCGCG AAGCGAAAAT TGCCCGCGGC ACCGAGGATG GCGTTGAGCA GGTGACCGCA GGCGATCGCG AGCTGCCGCA GTTGTCGCCC AACGATGATG GCGTGCGCCG TTTCATCGCG CTGGTCGACG AGTGCTATGA CCGGCGCATT CCGCTGTATG TCGAAGCGCC GGTGCCGATG GACGAGCTGT ACACCGAGGG CTACCTGTCG TTTGCCTTCC GGCGCACCCT CAGTCGACTT CAGGAAATGC AGCTGGAGCG TTTCACCGAG TCCTGA
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Protein sequence | MDAVSPLQAY ERAVQRGFQP DQAQLQAARQ LQACYEGLAD ARGRARGVYL WGPVGRGKTW LMDRFFESLS VPARRQHFHH FMRWVHKRMF ELMGTSQPLT VVARELARDV RVMCFDELFV TDIGDAVILG GLLQVMFEEG VVLVCTSNQP PEQLYSHGHN RERFLPAVAA ILKYMDVVAV DGGEDHRLHP GQLHQRYWIA EAGRPSALQG IFDALSADQP VHDSQVMLGY RSINVVQHSD TAVWCRYRDL CEQPLAAMDF IALCDRFSVI LLSEVPLLGA AQREAKIARG TEDGVEQVTA GDRELPQLSP NDDGVRRFIA LVDECYDRRI PLYVEAPVPM DELYTEGYLS FAFRRTLSRL QEMQLERFTE S
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