Gene Psyr_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3360 
Symbol 
ID3368887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4017568 
End bp4018719 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID637653711 
Productmajor facilitator transporter 
Protein accessionYP_236430 
Protein GI66046589 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0738289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.406179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTT TCAGCACCGC AGCCCAGGAT GCCAAGGCTC GGGCGGAACA GTCTTCAACG 
CGTATCGCGT TTTTCATTGC CGGTTTCAGC GTGGCCTCGT GGGCGCCGCT GGTGCCTTAC
GTCAAACAGC GGATGGGCCT TGATGAGGGC ACACTCGGGC TCTTGTTGTT GTGCCTGGGG
GTGGGCTCGA TCATTTCGAT GCCGCTGGCG GGCGCACTGG CGGCGCGGTT TGGCTGTCGG
CGCCTGCTGG TGTGTTCGAC GCTGTTGATC TGCCTGTGCC TGCCGCTACT GGCGACGATT
TCCAGTCTGC CGCTATTGAT AGCCACGCTG TTTCTGTTTG GTGCGAGCAT GGGCGGAGTG
GATTGCACGG CCAACGTGCA GGCGGTGATT GTCGAGCGCG CCAGCGGCAA GACGATGATG
TCGGGTTTTC ACGGCCTGTT CAGCCTCGGC GGGATTGTCG GTGCGGCGGG TGTCGCCGGC
CTGCTCAGCC TGGGTATCTC GCCTTTTGCT GCGATGCTGA TTGTGGTGGT GCTGACCCTG
GCCGCGCTGG CGAAAGCGGC GCCAAATCTA TTGCCCTATG GCAGTCCGTC CGATGGACCG
GCCTTTGCGA TTCCGCGTGG CGTGGTGCTG TTTATCGGCC TGCTGTGCTT CACTGTATTC
CTGGCCGAAG GCGCGATGCT CGACTGGAGC GCGGTATTCC TGACCTCGTT GCGGGGTGTC
GAGCCTTCCT ATGCCGGGCT GGGTTATGCG GTATTCGCCG CGACCATGAC CCTGGGACGG
CTGTTTGGCG ATGCAGTGGT AAAACGGGTC GGCTCCACTC GAGTGATCAT TCTCGGCGGA
CTGTGTGCCG CGGCGGGCCT GGCCGTCGCG ACATTGATCC CGTTCTGGCA GGCTGCGCTG
CTGGGGTATG CACTGGTGGG GGCGGGTTGC TCGAACATCG TGCCGGTCTG CTACAGCGCA
GCCGGTCGGC AGAAGACCAT GCCTGAAAGC GTGGCCATCC CGGCCATTAC TACAGTCGGC
TACGCCGGGA TTCTGATCGG TCCTGCGGCA ATCGGTTTCA TCGCCCATGT CAGCAGCCTT
GAACTGGCGT TCATGATCGT CGCCGTGATG CTGGTAGGCG TGGCGATCGG CGGCAGCAAG
CTCAGGACCT GA
 
Protein sequence
MTSFSTAAQD AKARAEQSST RIAFFIAGFS VASWAPLVPY VKQRMGLDEG TLGLLLLCLG 
VGSIISMPLA GALAARFGCR RLLVCSTLLI CLCLPLLATI SSLPLLIATL FLFGASMGGV
DCTANVQAVI VERASGKTMM SGFHGLFSLG GIVGAAGVAG LLSLGISPFA AMLIVVVLTL
AALAKAAPNL LPYGSPSDGP AFAIPRGVVL FIGLLCFTVF LAEGAMLDWS AVFLTSLRGV
EPSYAGLGYA VFAATMTLGR LFGDAVVKRV GSTRVIILGG LCAAAGLAVA TLIPFWQAAL
LGYALVGAGC SNIVPVCYSA AGRQKTMPES VAIPAITTVG YAGILIGPAA IGFIAHVSSL
ELAFMIVAVM LVGVAIGGSK LRT