Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3357 |
Symbol | |
ID | 3368884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4015162 |
End bp | 4016046 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653708 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_236427 |
Protein GI | 66046586 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.434273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.433607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTATT CACCCGAAGC CCTGGAAGCC TTCGCCCAGA TTGCTGCGCT GGGTTCGTTC AGCGCCGCCG CACGCCGGCT GGGCAAGAGT CAATCGACCA TCAGTGAAGC AATCGCCCGC CTGGAAATCG ATCTGGGCCT GGAGCTGTTC GATCGTTCTT CCAGGCAACC GGTCCTGACC GAAGCGGGGA GGGTCATGCT GGGTCGTGTC GATGATCTGC TGTGCGCCTC GGACCGGCTG CGTCGCGCGG CTGCGCGGCT TGCGGCAGGC GTCGAGCCAC GGCTGACGCT GGTGCTGTCG GATGCCAACC AGTTTGCCGA TTTCGAACGG CTGATGACCG AGCTCGATCA ACGCTTTCCA GAGCTGGAGA TGGAATGCGT GTTCGCCGAG CATGGCGACG CCATCAGCCT GGTGCAGTCG GGGAGGGCGT CACTGGGGCT GCTGTCGGCA CAAGCCAGCT ATCCACCGGA AATCGGTCAC GCGACCATCG ATGAAAGTGC CGATTTCGGG CTGTTCGTGT CGCACAAACA TCCGCTTGCC GCGCTGGAAC GGGTCGATTA CCAACAGCTG GCCCGCTATC GCGCCTTGCG CCTCAATACG CTGATCGAGC ACAGCATCCC CACTGACGAC CTGCCCACCA GCGGCCATCG GCATTGGTCG GCACCCAATT ACCTGCTGTT GATGGACATG GCTGCGTTCG GGTTTGGCTG GTCGGCATTG CCGCGCTGGC TGGTGTCGCG CTACTCGGGC GGACTGCTGA AAGAACTGCA AGTCTCAGGC TGGCCACGGC GCTCGGCGGT GGACGTCATC TGGTCGTTCC AGCGCAGTCT GGGGCCTGCG GGGGCGTGGC TGCTGGAGTC GCTGGTACCG TTTGCGGGAG AGTGA
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Protein sequence | MSYSPEALEA FAQIAALGSF SAAARRLGKS QSTISEAIAR LEIDLGLELF DRSSRQPVLT EAGRVMLGRV DDLLCASDRL RRAAARLAAG VEPRLTLVLS DANQFADFER LMTELDQRFP ELEMECVFAE HGDAISLVQS GRASLGLLSA QASYPPEIGH ATIDESADFG LFVSHKHPLA ALERVDYQQL ARYRALRLNT LIEHSIPTDD LPTSGHRHWS APNYLLLMDM AAFGFGWSAL PRWLVSRYSG GLLKELQVSG WPRRSAVDVI WSFQRSLGPA GAWLLESLVP FAGE
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