Gene Psyr_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3357 
Symbol 
ID3368884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4015162 
End bp4016046 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID637653708 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_236427 
Protein GI66046586 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.434273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.433607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATT CACCCGAAGC CCTGGAAGCC TTCGCCCAGA TTGCTGCGCT GGGTTCGTTC 
AGCGCCGCCG CACGCCGGCT GGGCAAGAGT CAATCGACCA TCAGTGAAGC AATCGCCCGC
CTGGAAATCG ATCTGGGCCT GGAGCTGTTC GATCGTTCTT CCAGGCAACC GGTCCTGACC
GAAGCGGGGA GGGTCATGCT GGGTCGTGTC GATGATCTGC TGTGCGCCTC GGACCGGCTG
CGTCGCGCGG CTGCGCGGCT TGCGGCAGGC GTCGAGCCAC GGCTGACGCT GGTGCTGTCG
GATGCCAACC AGTTTGCCGA TTTCGAACGG CTGATGACCG AGCTCGATCA ACGCTTTCCA
GAGCTGGAGA TGGAATGCGT GTTCGCCGAG CATGGCGACG CCATCAGCCT GGTGCAGTCG
GGGAGGGCGT CACTGGGGCT GCTGTCGGCA CAAGCCAGCT ATCCACCGGA AATCGGTCAC
GCGACCATCG ATGAAAGTGC CGATTTCGGG CTGTTCGTGT CGCACAAACA TCCGCTTGCC
GCGCTGGAAC GGGTCGATTA CCAACAGCTG GCCCGCTATC GCGCCTTGCG CCTCAATACG
CTGATCGAGC ACAGCATCCC CACTGACGAC CTGCCCACCA GCGGCCATCG GCATTGGTCG
GCACCCAATT ACCTGCTGTT GATGGACATG GCTGCGTTCG GGTTTGGCTG GTCGGCATTG
CCGCGCTGGC TGGTGTCGCG CTACTCGGGC GGACTGCTGA AAGAACTGCA AGTCTCAGGC
TGGCCACGGC GCTCGGCGGT GGACGTCATC TGGTCGTTCC AGCGCAGTCT GGGGCCTGCG
GGGGCGTGGC TGCTGGAGTC GCTGGTACCG TTTGCGGGAG AGTGA
 
Protein sequence
MSYSPEALEA FAQIAALGSF SAAARRLGKS QSTISEAIAR LEIDLGLELF DRSSRQPVLT 
EAGRVMLGRV DDLLCASDRL RRAAARLAAG VEPRLTLVLS DANQFADFER LMTELDQRFP
ELEMECVFAE HGDAISLVQS GRASLGLLSA QASYPPEIGH ATIDESADFG LFVSHKHPLA
ALERVDYQQL ARYRALRLNT LIEHSIPTDD LPTSGHRHWS APNYLLLMDM AAFGFGWSAL
PRWLVSRYSG GLLKELQVSG WPRRSAVDVI WSFQRSLGPA GAWLLESLVP FAGE