Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3347 |
Symbol | |
ID | 3368874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4003229 |
End bp | 4003846 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653698 |
Product | regulatory protein, TetR |
Protein accession | YP_236417 |
Protein GI | 66046576 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.235212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0210246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCC GTACTGAAGC TCGCCGCGAA GCCATCATTG ATGCCGCAGC AAGTGTCTTC CTCGAAATGG GCTACGAGCG TGCCTCGATG AATGAAGTCA CCAAACGAAT GGGTGGCTCC AAGGCAACGA TCTATAGTTA CTTTCCCTCC AAGGAAGAAC TGTTCATCGC TGTGGTCAAC AGGCTTGCAA CTGCCCATCT GGCCGACGCG GTTTCAGAGC TGGCGATCCA GGATGACAAA CCGATCGATT TGCGGGCCCT GTTCACGCGC TTCGGGGAAC GCATGCTGAT GGTGCTTATC AATGATGACA AGGCATTGGC CGTGTATCGC ATGGTAGTGG CCGAGTCCGG GCACTCGGAC ATCGGCATGA TGTTCTACGA GTCCGGCCCC AGCCAGTGCC TGCAGACAGT TACCTCGCTC ATGACTCTGG CGATGCGAAA AGGCCAGTTG CGTGAAACCG ATCCGCACAT CGCCTCGTTG CAGCTGACCT CGCTGTTGAC TGCCGAGACC GACATTCGCC TTTACCAACA GGCGCCCATG CCGCTGAGCA TCGAAGAAAT TCGCGCCATG GTCGAACGCG CAGTGGATAC CTTCATGTTG GGTATGGAGA AACGTTGA
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Protein sequence | MKVRTEARRE AIIDAAASVF LEMGYERASM NEVTKRMGGS KATIYSYFPS KEELFIAVVN RLATAHLADA VSELAIQDDK PIDLRALFTR FGERMLMVLI NDDKALAVYR MVVAESGHSD IGMMFYESGP SQCLQTVTSL MTLAMRKGQL RETDPHIASL QLTSLLTAET DIRLYQQAPM PLSIEEIRAM VERAVDTFML GMEKR
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