| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3344 |
|---|
| Symbol | |
|---|
| ID | 3368871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3999241 |
|---|
| End bp | 4000131 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637653695 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_236414 |
|---|
| Protein GI | 66046573 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00702344 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCA TCATTCTTGG CCTGCCCGTC GGCTGTGCAG TGCTTGAACA CAAGGAGCGC
CAACTGGTGT TTCGCATCGA GCCCGGTACC GCCAGCTGGT ACAGCGGTCT GCCGGCAGAT
GTGCAGGAAA TCGAACTCAG TACACCGGCA TTCGGTACCT CGCAGAATAT CCACGCATGG
TGGTGGCCCG CTGCGGACAA GAACGCCCCG GCGGTGTTGT ACCTGCATGG ATCACGATGG
AACCTCACCG GCCAGCTGTT CCGTATCCAG CAACTCAAGG CACAGGGCTA CTCGATACTG
GCGATCGATT ACCGGGGTTT CGGGCAAAGC ATGGGCCAAC TGCCTTCGGA AAGGTCTGTA
TATGAAGACG CACGCATCGC CTGGGAACGC CTGAAGCAAT TGCAACCCGA CCCGCAGCGC
AGGCTGATTT ATGGACACTC TCTGGGCGGT GCGGTGGCAG TGGATCTGGC TGCCGAGCTG
GGCGAAGACG CTGAAAAGGA CAATGCACCC ATTCAGGCCC GCGGGCTGAT CATCGAATCC
ACGTTCACCA ACCTCGCCGA TGTGGCCACC GCGCTTGCCA ACACATCGTT GCCGGTGCGT
TGGCTGCTGT CGCAGAAGTT CGACTCGCTG GACAAGATTG CAGACATCCA TATGCCGGTG
CTGATCGTGC ACGGCACCGA GGATCGCTAT GTACCGGCAC GCTTCAGCGA ACAGTTGTTT
GAGGCCGCGC AGGAACCGAA GAAACTGCTA CTGGTGCCTG GCGGTACGCA TAACAACAGC
ATGCAGCTCG GGCAGCCCGC TTACAGCCAG GCCATTCGTG CCCTGCTCGA TACACCCGCA
TCGCTGCCTC AGGTAACACA ACAGGGCAAG GACTCGAAGA ACGCCGGTTA G
|
|---|
| Protein sequence | MTTIILGLPV GCAVLEHKER QLVFRIEPGT ASWYSGLPAD VQEIELSTPA FGTSQNIHAW
WWPAADKNAP AVLYLHGSRW NLTGQLFRIQ QLKAQGYSIL AIDYRGFGQS MGQLPSERSV
YEDARIAWER LKQLQPDPQR RLIYGHSLGG AVAVDLAAEL GEDAEKDNAP IQARGLIIES
TFTNLADVAT ALANTSLPVR WLLSQKFDSL DKIADIHMPV LIVHGTEDRY VPARFSEQLF
EAAQEPKKLL LVPGGTHNNS MQLGQPAYSQ AIRALLDTPA SLPQVTQQGK DSKNAG
|
|---|
| |