Gene Psyr_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3343 
Symbol 
ID3368870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3998323 
End bp3998820 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID637653694 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_236413 
Protein GI66046572 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00591936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCACTC ACCGTCCCCT GAAAGAAAAA GACGTCCCTC TCATCTGCAA GCTGCCGCAG 
GATGCCGATG AGCTGTTCTA CATGTTCCCC AGGGCAACGT ACCCGTTGAC TGCCTCACAA
CTCAGTGAAG CGCTTCAAAC GCGCCATGAC TCGACCGTCA TCGAAATGGA CGGTGAGGTG
GTAGGCTTTG CCAATTTCTC TCACTGCACC TTTCGCGGTC GCTGTTCGCT GGGCAACGTC
ATCATCGCAC CGAAGGCCCG GTCCAGAGGG GTAGGGCGCT TCATGATCAC CACCATGATG
GGGATCGCGT TCGACAAGCA CGAAGCGAGC GAAATGATCG CGTCGTGCTT CAACCACAAC
GTGCCAGGCT TGCTGTTCTA CCCGCGGATG GGGTTTCGTC CGTTCCACAT TGAAGAAAAG
CGCGATAAGC GCGGCGAGCG TGTTGCGCTG ATTCATCTGC GGCTGTCCGG CAAGGACCTG
GAACATACAC AAGAGTAA
 
Protein sequence
MFTHRPLKEK DVPLICKLPQ DADELFYMFP RATYPLTASQ LSEALQTRHD STVIEMDGEV 
VGFANFSHCT FRGRCSLGNV IIAPKARSRG VGRFMITTMM GIAFDKHEAS EMIASCFNHN
VPGLLFYPRM GFRPFHIEEK RDKRGERVAL IHLRLSGKDL EHTQE