Gene Psyr_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3334 
Symbol 
ID3368861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3989572 
End bp3989979 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content63% 
IMG OID637653685 
Producthypothetical protein 
Protein accessionYP_236404 
Protein GI66046563 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0126632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00217166 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATCA AAGCCGTCCT GACCCAGACC GAAGTCAGCC TGATGCTCGG CACCGCACGC 
GAAGAGGCGC AGGCCAATGG CTGGGCCGTG TCCATCGCCG TCGTTGATGA CGGCGGCCAT
TTGCTGGCAT TCGAGAGACT GGACGACGCC GCCGCCATCA GCAGCTACAT CGCGATTGAA
AAGGCGCGCA CCTCGGCACT CGGCAAACGT GAATCCAAGG GGTACGAAGA GATGGTCAAT
GGCGGGCGCA CTGCATTCCT GAGTGCTCCG CTGCTGACGT CGCTGGAAGG CGGTGTGCCG
GTCATCGTCG ACGGCCAGGT CATCGGTGCG CTGGGGGTTT CAGGCGTGAA GGCCGAACAG
GATGCTCAGA TCGCCAGGGC CGGTGTCGCA GCGCTTGACG CCGACTGA
 
Protein sequence
MKIKAVLTQT EVSLMLGTAR EEAQANGWAV SIAVVDDGGH LLAFERLDDA AAISSYIAIE 
KARTSALGKR ESKGYEEMVN GGRTAFLSAP LLTSLEGGVP VIVDGQVIGA LGVSGVKAEQ
DAQIARAGVA ALDAD