| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3332 |
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| Symbol | glcE |
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| ID | 3368859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3987243 |
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| End bp | 3988301 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637653683 |
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| Product | glycolate oxidase FAD binding subunit |
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| Protein accession | YP_236402 |
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| Protein GI | 66046561 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.196068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000126802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCACGA TGGACAACGA TGTCAGCCAG GCACTGCTCG AGCGGGTCGA ACAGGCGCTG
CGCGACAACA CGCCGTTACG TCTTCAGGGC GGTAACAGCA AGGCTTCTCT CGGTCGTGAA
ACCGCTGGTG AAGTACTTGA TACGCGCGAG CACCGTGGCA TCGTCACTTA TGACCCGACA
GAGCTGGTGA TTACTGCGCG CGCCGGCACG CCATTGAGCG AGCTGATCCA GACACTGGAT
GCCGCAGGCC AGATGCTGCC TTGCGAACCG CCAGACTTTG GCGCTGCGAC GCTCGGCGGT
ATGGTCGCTG CGGGGCTTTC GGGACCGCGC CGCCCGTGGA GCGGGTCGGT GCGTGATTTC
GTGCTGGGCA CACGGGTCAT CACCGGTCTT GGCAAGCACC TGCGTTTCGG CGGAGAAGTC
ATGAAGAACG TCGCAGGCTA CGACGTTTCG CGCCTGATGG CAGGCAGTTT CGGCTGCCTG
GGGCTGCTGA CCGAGGTGTC GCTCAAAGTG CTGCCAAAAC CACGTCTGTG CAGCAGTATC
GCGCTGGAAA TGGACAGCAC GCTGGCCCTG GCGCGCCTTG CCGAGTGGGG TCAGCAACCG
ATACCGATCA GCGCAGCCAG CCACGATGGC CACGTACTAC GCCTGCGCCT GGAAGGTGGT
GAAGGTTCAG TGGCAGCAGC CCGGGACCGG CTCGGCGGCG AGCTGCTCGA TGCCGCCTAC
TGGCAGCAGT TGAATGCGCA TCGCCTGCCC TTCTTCGATG ACCCGCGGCC CCTGTGGCGG
CTCTGTGTAC CTGCCGACAG CCGCCTGCCG GATCTGCCGG GCGAGCAACT GATCGACTGG
GGTGGCGCGC AACGCTGGCT CAAGTCGGAC GCGGACGGAC AAACCATTAG AGCGATCACC
ATGGCGGTTG GCGGCCATGC GACCTGCTAC AGCCAGGGCG TCGTCGACAG CCCCTTCGAA
CCGTTGGCCG CACCTGTGCT GCGCTACCAT CAGGCACTCA AGACCCGACT CGACCCGCAG
GGGATTTTCA ACCCCGGCCG ACTGTACGCG GAGCTTTGA
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| Protein sequence | MSTMDNDVSQ ALLERVEQAL RDNTPLRLQG GNSKASLGRE TAGEVLDTRE HRGIVTYDPT
ELVITARAGT PLSELIQTLD AAGQMLPCEP PDFGAATLGG MVAAGLSGPR RPWSGSVRDF
VLGTRVITGL GKHLRFGGEV MKNVAGYDVS RLMAGSFGCL GLLTEVSLKV LPKPRLCSSI
ALEMDSTLAL ARLAEWGQQP IPISAASHDG HVLRLRLEGG EGSVAAARDR LGGELLDAAY
WQQLNAHRLP FFDDPRPLWR LCVPADSRLP DLPGEQLIDW GGAQRWLKSD ADGQTIRAIT
MAVGGHATCY SQGVVDSPFE PLAAPVLRYH QALKTRLDPQ GIFNPGRLYA EL
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