| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3331 |
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| Symbol | |
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| ID | 3368858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3985744 |
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| End bp | 3987243 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637653682 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_236401 |
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| Protein GI | 66046560 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000167182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACATTC TGTACGACGA ACGCATCGAC GGCGTGCTGC CTGCCGTCGA CAAGCAGCAA
CTGTTGCAGG CGCTGCAACA GCAGTTGCCC GACCTGGACA TCCTGCATCG CCCCGAAGAG
CTGCGGCCTT ATGAGTGCGA CGGGTTGTCA GCCTATCGCA CCACACCGAT GCTGGTGGCG
TTGCCGCGTC ATGTGGAAGA AGTCCAGACG CTGCTCAGGC TGTGCCACGC ACGGCGCGTA
CCGGTGGTCG CTCGTGGGGC GGGCACCGGG CTGTCGGGTG GCGCGCTGCC GCTGGAAAAA
GGCGTGCTGC TGGTCATGGC GCGCTTCAAT CAGATCCTCG AGATCGACCC TTCGGCGCGC
CTGGCGCGGG TTCAGCCCGG CGTGCGCAAC CTGGCCATTT CCCAGGCGGC AGCGCCCCAC
GGCCTGTATT ACGCGCCAGA CCCGTCCTCG CAAATCGCCT GCTCCATCGG CGGCAATGTG
GCGGAAAATG CCGGCGGCGT GCACTGCCTC AAGTACGGGC TGACCGTGCA TAACCTGCTC
AAGGTCGAGA TCCTGACGGT GGAAGGCGAG CCCATGACGC TGGGCAGCGA CACGCTGGAC
TCGCCGGGCT TCGACCTGCT GGCACTGTTC ACCGGCTCCG AAGGCATGCT CGGCGTCATT
ACCGAAGTCA CCGTCAAGTT GTTGCCCAGA CCGCAAGTGG CCAAAGTACT GCTGGCAGCG
TTCGATTCCG TGGAAAAGGC CGGACGTGCA GTGGCCGATA TCATTGCGGC GGGCATCATC
CCCGGCGGGC TGGAGATGAT GGACAATCTG GCGATTCGTG CCGCCGAGGA TTTCATTCAC
GCAGGCTACC CGGTCGATGC CGAAGCCATC CTGCTCTGCG AACTGGACGG CGTCGAAGCC
GATGTGCACG CTGACTGCGA ACGGGTCAGC GAGGTCTTGA CACGGGCGGG CGCCACCGAC
GTGCGCCAGG CGAAAGACGA GGCCGAACGG GTCCGCTTCT GGGCCGGGCG CAAAAACGCT
TTCCCGGCCG TGGGTCGCCT GTCGCCGGAT TACTACTGCA TGGACGGGAC CATCCCGCGC
CGTGAGCTGC CGGGCGTATT GCGCAGCATC AGGGAGTTAT CCGGGCAATA CGGCTTGCGT
GTCGCCAACG TGTTTCATGC CGGTGACGGC AACATGCACC CGCTGATCCT GTTCGACGCC
AATCAACCGG GTGAGCTGGA GCGCGCCGAG GCACTGGGCG GCAAAATCCT TGAGCTGTGC
GTCAAGGTTG GCGGCAGCAT CACCGGCGAG CACGGTGTCG GTCGCGAGAA GATCAATCAG
ATGTGCGCCC AGTTCAATAG CGACGAGCTG ACCTTCTTCC ATGCCATCAA GGCGGCATTC
GACGCCAGCG GTCTGCTCAA CCCTGGCAAG AACATCCCGA CCCTGCACCG TTGCGCGGAA
TTTGGTGCCA TGCACATCCA CGCCGGGCAA TTGCCGTTCC CCGACCTGGA GCGCTTCTGA
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| Protein sequence | MNILYDERID GVLPAVDKQQ LLQALQQQLP DLDILHRPEE LRPYECDGLS AYRTTPMLVA
LPRHVEEVQT LLRLCHARRV PVVARGAGTG LSGGALPLEK GVLLVMARFN QILEIDPSAR
LARVQPGVRN LAISQAAAPH GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
KVEILTVEGE PMTLGSDTLD SPGFDLLALF TGSEGMLGVI TEVTVKLLPR PQVAKVLLAA
FDSVEKAGRA VADIIAAGII PGGLEMMDNL AIRAAEDFIH AGYPVDAEAI LLCELDGVEA
DVHADCERVS EVLTRAGATD VRQAKDEAER VRFWAGRKNA FPAVGRLSPD YYCMDGTIPR
RELPGVLRSI RELSGQYGLR VANVFHAGDG NMHPLILFDA NQPGELERAE ALGGKILELC
VKVGGSITGE HGVGREKINQ MCAQFNSDEL TFFHAIKAAF DASGLLNPGK NIPTLHRCAE
FGAMHIHAGQ LPFPDLERF
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