Gene Psyr_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3322 
Symbol 
ID3368849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3973247 
End bp3974473 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content60% 
IMG OID637653673 
Productmajor facilitator transporter 
Protein accessionYP_236392 
Protein GI66046551 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0892776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGC GTGGCTCGGC GGTTCAGAAT ATGGGGTTGA TGATCAGTGT CCTGTTGGTG 
GCGCTGAACC TGCGCCCGTC GATGGCCGCG GTCGGTCCAT TGCTGGTGGC GATTCGTCTG
GACGTCCCGC TGGGTTTCGG AACGGCGTCG TTGCTGACCA TGCTGCCGGT CATGGCCATG
GGACTGGCCA TGTTTTTCGG CATGGGCATT GCTCGTTACC TGGGTTCGTA TCGCAGCATC
ATGCTTTCAC TGGCGCTTAT CGGTCTGGCA ACCCTGGCGC GTCTGTTTCT CGATTCTGCT
GCCGAACTGA TTTTCAGCGC TGTGCTGGCG GGTCTGGGTA TTGCCTTGAT TCAGGCGCTG
ATGCCCGCGT TGATCAAATC GCGCTTCAAG GCCGACGTCT CCTTGTACAT GGGGCTGTAC
GTGACCGCGA TTATGGGCGG GGCCGCGCTG GCCGCCTCAT TCAGCCCTCT GCTAATGAGC
AGCAGTGGCA GTTGGCGCGT CGGCCTGGCG GTCTGTTCGC TACTGGCTCT TCTGGCAATG
TGCTTCTGGT TTGCCCAGCG GCACGTGTTG CAGTCCGACG CGTCAATCGC TGCAGGGCAC
CGGCAGACCT TCTTCCACAT GCCTCGGGCC TGGATGCTGG GGATTTTCTT CGGTCTTGGC
ACTGCGTCCT ATACCTGTGT GTTGGCCTGG CTGGCGCCCT ATTATCTGGA AAACGGCTGG
GGTGAGCAGG GTGCAGGGTT ACTGCTGGGC TTTCTGACCC TGATGGAGGT CGTATCGGGT
CTGCTGGTTC CGGCGCTGGC CAACCGCAGT CGCGATAAGC GCGTGGCGCT GGTTGTGCTG
CTGATATTGA TGATGACCGG CTTTGCCGGG CTGATTTTGA TGCCGCAGCA GTTGGGCCTG
CTGTGGGCAT GCCTGCTGGG CTTGGGGATT GGCGGTCTTT TTCCGATGAG CCTGATCGTG
TCCATGGATC ATTGCGATGA TCCGCAGCAG GCGGGCAGCC TGACGGCATT CGTGCAGGGC
GTGGGTTATC TGATCGCCAG CCTGTCGCCG CTGCTTGCCG GAGTGATTCG TGACCTGACG
GGCAGCTTTG CGGGTGCATG GTGGTCACTG ATGGCGTTGG TCGTGATCAT GCTGTTGATG
GTGGTGCGAC TCGACCCTCG ACGTTATGCT GATCATCTGC GCGACGCACT CGGCGAACCT
GTCATCACTG GCAGACAGGC TGAATGA
 
Protein sequence
MQMRGSAVQN MGLMISVLLV ALNLRPSMAA VGPLLVAIRL DVPLGFGTAS LLTMLPVMAM 
GLAMFFGMGI ARYLGSYRSI MLSLALIGLA TLARLFLDSA AELIFSAVLA GLGIALIQAL
MPALIKSRFK ADVSLYMGLY VTAIMGGAAL AASFSPLLMS SSGSWRVGLA VCSLLALLAM
CFWFAQRHVL QSDASIAAGH RQTFFHMPRA WMLGIFFGLG TASYTCVLAW LAPYYLENGW
GEQGAGLLLG FLTLMEVVSG LLVPALANRS RDKRVALVVL LILMMTGFAG LILMPQQLGL
LWACLLGLGI GGLFPMSLIV SMDHCDDPQQ AGSLTAFVQG VGYLIASLSP LLAGVIRDLT
GSFAGAWWSL MALVVIMLLM VVRLDPRRYA DHLRDALGEP VITGRQAE