Gene Psyr_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3301 
Symbol 
ID3368828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3949787 
End bp3951223 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content59% 
IMG OID637653652 
Productundecaprenyl-phosphate galactosephosphotransferase 
Protein accessionYP_236371 
Protein GI66046530 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.783093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTGC AGCCCGTTGA CAGTCTTTCG CTGACCCGCA CCAGCCTGGT CGAATACTTT 
CTTTTCGGTA TCCGCCTGGC TCACGGCGTC GCCTGCATTT TGCCGGGCCT CCTGATCATG
ATGCTGATCA AGGATGGCAG CCCGGAAACG CAGAAGAGTT ACATGGCCAT GCTGCTGTTT
TTCGGCTTTG TCGGGCTGCT GGTGTTTCAG GCCATGGGCG TCTATTCCGA AGCACTGTTC
AGCAACGACC TGCGCATGGG CGCAATGGCG CTGGCCTGGA CTGCCGCCTT CGGACTGTTG
CTGTTCATGC AGCAGGCGAT GGGCCTGTTC GGCTACCTTC CCCCCGAAGA ACTGCTGATC
TGGTATCTGA CCAGCCTTGC GCTGTTCGGC ATCATTCGCC TGCTGTTGCT GATGCTGTTC
AAACATCAGA TGCGCAAGGG CGTCTTCCTG CAGCATGCCG TGATCCTCGG CGCGACGGAA
AACGGCCAGC GTCTGGCTGA ATACCTGCTT GAACATCAGG ACATTCGTTC GGGGGTGACC
GGCTTTATCG ACGACCGTAT CGGGCGCATG CCCAAGACCG TCGCCAACCT GCCACTGCTG
GGCAATACCA ACGACCTGGA ACGGCTGATC CGTGAAGAGA AAGTGACTCA GGTGCTGGTC
GCCCTGCCCT GGACGGCAGA AAACCGCATG GACTACATCA TCCGCGAATT GCGCAGGCTA
CCGGTCAATG TGTTGCTGGT GCCGGACATG ATCGCTTTTC GACACACTCA CAACCGCATC
ACCGAAGTCG CCCGGCTGCC GATGTTCAAT GCCTCGGACC TGCCGCTCAG TGGCTGGTCG
CCGTTCATCA AACGCGCTGA AGACATCGTG CTGTCATCGC TGGCATTGCT GGCGCTGTCC
CCCTTGATGC TGCTGGTCGC ACTGGCGATC AAGCTCGATT CGCCAGGCCC GGTGTTTTTC
CGTCAGAAGC GCTATGGGTA CAACAATCGC CTGATCGAAG TGTTCAAGTT CCGCTCCATG
CATCAGCACC AGGCCGATGC GACGGCCGAG CGGCAAACCA CCCGCGGCGA CGCCAGAATC
ACCCGGGTCG GACGCTTCAT TCGCAAGACC AGCCTGGATG AACTGCCACA GCTGTTCAAC
GTGGTGGCGG GCAGCATGTC GATGGTCGGG CCGCGCCCGC ATGCCACGGC GACCAAGGCT
GCCGGGATTC TGTTCGAGCA GGCAGTGAAG GAATACACCT CGCGGCATCG CGTCAAACCA
GGCATTACCG GGCTGGCGCA GATCAACGGC TATCGGGGTG AAACCGACAC CGTTGAAAAA
ATCGAAAAAC GCGTCGAGTT CGACCTTGAG TACATAGAAA ACTGGTCCGT CTGGTTCGAC
CTCTACATCC TTATGCGCAC CGTGCCTGCA GTGCTATTCA CCCGTGAGGC TTACTGA
 
Protein sequence
MRLQPVDSLS LTRTSLVEYF LFGIRLAHGV ACILPGLLIM MLIKDGSPET QKSYMAMLLF 
FGFVGLLVFQ AMGVYSEALF SNDLRMGAMA LAWTAAFGLL LFMQQAMGLF GYLPPEELLI
WYLTSLALFG IIRLLLLMLF KHQMRKGVFL QHAVILGATE NGQRLAEYLL EHQDIRSGVT
GFIDDRIGRM PKTVANLPLL GNTNDLERLI REEKVTQVLV ALPWTAENRM DYIIRELRRL
PVNVLLVPDM IAFRHTHNRI TEVARLPMFN ASDLPLSGWS PFIKRAEDIV LSSLALLALS
PLMLLVALAI KLDSPGPVFF RQKRYGYNNR LIEVFKFRSM HQHQADATAE RQTTRGDARI
TRVGRFIRKT SLDELPQLFN VVAGSMSMVG PRPHATATKA AGILFEQAVK EYTSRHRVKP
GITGLAQING YRGETDTVEK IEKRVEFDLE YIENWSVWFD LYILMRTVPA VLFTREAY