| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3300 |
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| Symbol | |
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| ID | 3368827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3948347 |
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| End bp | 3949264 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637653651 |
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| Product | lipid kinase |
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| Protein accession | YP_236370 |
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| Protein GI | 66046529 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.336089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAAC GCAGGGCAAT GCTCATTCTT CACGGTAAAC AGGCGCTCAA TGAAGATGTA
CGTGACGCGG TGGCAGACAA GCGCAAGCAG GGCTGGGAAC TGGACGTGCG ACTGACCTGG
GAAGCTGGCG ATGCCCAGCG CCTGGTCAGC GAAGCCCTGG CGGCCGGCCA TCGGCACATC
GTCGCAGGTG GTGGCGACGG CACCTTGCGC GATATCGCCG AAGCCCTGGC CCTGGCCGAA
ACCAGTGCCA GCCTGACTAT TCTGCCGCTG GGGACTGCCA ACGATTTTGC CCGTGCGGCC
GGCGTGCCGC TGGAGGTCTC CAAAGCCCTG CAACTGATGG ACGTGGCCCC GCGTGCCGTC
GATCTGGGTG AGGTCGGTGG CAAGCTGTTC CTCAACATGG CGACCGGCGG GTTTGGCAGC
CAGGTCACGG CGAACACGTC CGAGGACCTC AAGAAGGTGC TGGGGGGGGC CGCCTATCTG
TTTACCGGCC TGACCCGATT CAGCGAGCTG CATTCGGCGC ATGGCGAGCT CACCGGACCG
GATTTCCACT GGCGCGGCGA TCTGCTTGCC CTGGGTATCG GCAATGGTCG GCAGGCGGGC
GGTGGACACG AGCTGTGCCC GACCGCACTG GCCGATGATG GTCTGCTCGA CATCAGTATC
CTGCCAGCGC CTCAGGAAGT GGTCGGCACG CTGAGGAGCC TCCTGGAGGG CGGGCTGGGT
ATCGATAATA TGTTCATTCG TGCGCGTTTG CCGTGGGTAG AACTCAAGTC CACCCAGGGT
CTGGATATCA ATCTGGACGG TGAGCCGCTG TCGGGCGAGG ACCTGCGTTT CGAGGCCCGG
CCAGGCGCGC TTCACGTGCA CCTGCCAGCG GACTCGCCGT TACTGGGCGG CGCCCCGAAG
CTCAATCGTC CAGACTGA
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| Protein sequence | MTQRRAMLIL HGKQALNEDV RDAVADKRKQ GWELDVRLTW EAGDAQRLVS EALAAGHRHI
VAGGGDGTLR DIAEALALAE TSASLTILPL GTANDFARAA GVPLEVSKAL QLMDVAPRAV
DLGEVGGKLF LNMATGGFGS QVTANTSEDL KKVLGGAAYL FTGLTRFSEL HSAHGELTGP
DFHWRGDLLA LGIGNGRQAG GGHELCPTAL ADDGLLDISI LPAPQEVVGT LRSLLEGGLG
IDNMFIRARL PWVELKSTQG LDINLDGEPL SGEDLRFEAR PGALHVHLPA DSPLLGGAPK
LNRPD
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