Gene Psyr_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3283 
Symbol 
ID3368810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3930485 
End bp3931093 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content60% 
IMG OID637653634 
ProductLexA repressor 
Protein accessionYP_236353 
Protein GI66046512 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC TGACGCCACG CCAGGCTGAA ATCCTGGGTT TCATCAAACG CTGCCTGGAA 
GACAACGGGT TCCCGCCGAC ACGTGCGGAG ATCGCTCAGG AGCTGGGCTT CAAATCGCCC
AACGCGGCGG AAGAGCACCT CAAGGCCCTG GCCCGCAAAG GCGCTATCGA AATGACTCCG
GGTGCTTCAC GCGGCATTCG CATCCCCGGC TTCGAAGCGC GGCAGGACGA CAGCAGCCTG
CCCGTCATCG GCCGCGTTGC AGCAGGTGCA CCGATCCTGG CGCAGCAACA CATCGAGGAG
TCCTGCAACA TCAATCCTTC CTTCTTCCAC CCCAGCGCCA ACTACCTGTT GCGCGTTCAT
GGCATGAGCA TGAAGGACGT CGGCATTCTG GACGGTGATC TGCTCGCCGT GCACACCACG
CGTGAGGCTC GCAACGGCCA GATCGTGGTT GCCCGGATAG GCGATGAAGT GACCGTCAAG
CGTTTCAAGC GTGAAGGCAG CAAGGTCTGG CTGCTGGCGG AAAATCCTGA TTTCGCACCC
ATCGAGGTCG ATCTCAAGGA TCAGGAACTG GTGATCGAAG GTTTGAGCGT CGGCGTCATT
CGCCGCTAA
 
Protein sequence
MIKLTPRQAE ILGFIKRCLE DNGFPPTRAE IAQELGFKSP NAAEEHLKAL ARKGAIEMTP 
GASRGIRIPG FEARQDDSSL PVIGRVAAGA PILAQQHIEE SCNINPSFFH PSANYLLRVH
GMSMKDVGIL DGDLLAVHTT REARNGQIVV ARIGDEVTVK RFKREGSKVW LLAENPDFAP
IEVDLKDQEL VIEGLSVGVI RR