Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3283 |
Symbol | |
ID | 3368810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3930485 |
End bp | 3931093 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653634 |
Product | LexA repressor |
Protein accession | YP_236353 |
Protein GI | 66046512 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC TGACGCCACG CCAGGCTGAA ATCCTGGGTT TCATCAAACG CTGCCTGGAA GACAACGGGT TCCCGCCGAC ACGTGCGGAG ATCGCTCAGG AGCTGGGCTT CAAATCGCCC AACGCGGCGG AAGAGCACCT CAAGGCCCTG GCCCGCAAAG GCGCTATCGA AATGACTCCG GGTGCTTCAC GCGGCATTCG CATCCCCGGC TTCGAAGCGC GGCAGGACGA CAGCAGCCTG CCCGTCATCG GCCGCGTTGC AGCAGGTGCA CCGATCCTGG CGCAGCAACA CATCGAGGAG TCCTGCAACA TCAATCCTTC CTTCTTCCAC CCCAGCGCCA ACTACCTGTT GCGCGTTCAT GGCATGAGCA TGAAGGACGT CGGCATTCTG GACGGTGATC TGCTCGCCGT GCACACCACG CGTGAGGCTC GCAACGGCCA GATCGTGGTT GCCCGGATAG GCGATGAAGT GACCGTCAAG CGTTTCAAGC GTGAAGGCAG CAAGGTCTGG CTGCTGGCGG AAAATCCTGA TTTCGCACCC ATCGAGGTCG ATCTCAAGGA TCAGGAACTG GTGATCGAAG GTTTGAGCGT CGGCGTCATT CGCCGCTAA
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Protein sequence | MIKLTPRQAE ILGFIKRCLE DNGFPPTRAE IAQELGFKSP NAAEEHLKAL ARKGAIEMTP GASRGIRIPG FEARQDDSSL PVIGRVAAGA PILAQQHIEE SCNINPSFFH PSANYLLRVH GMSMKDVGIL DGDLLAVHTT REARNGQIVV ARIGDEVTVK RFKREGSKVW LLAENPDFAP IEVDLKDQEL VIEGLSVGVI RR
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