| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3281 |
|---|
| Symbol | |
|---|
| ID | 3368808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3928376 |
|---|
| End bp | 3929386 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637653632 |
|---|
| Product | beta-hexosaminidase |
|---|
| Protein accession | YP_236351 |
|---|
| Protein GI | 66046510 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTG GCCTGCAAGG CTCCCTGATG GTCGATGTCG CCGGCACCTG GCTGACCAGC
GAAGACCGTC AGTTTTTGCG TCAGCCCGAA GTGGGCGGTT TGATCATCTT TGCCCGAAAC
ATCGAGCATC CCCGTCAGGT TCGTGAATTG AGCGCCGCGA TTCGTGCCGT GCGCCCGGAC
CTGCTGCTGG CCGTCGATCA GGAGGGCGGC AGGGTACAGC GCCTGCGTGA GGGCTTCGTA
CGCCTGCCGC CGATGCGCGC CATCGCCGAC AAGCCTGACG CCGAGCTTCT GGCTGAACAC
TGTGGCTGGC TGATGGCGAC CGAAGTGCTG GCGGTCGGAC TGGACCTGAG CTTCGCCCCG
GTGCTGGACC TCGACTACCA GCGCAGCGCT GTGGTCGGCA CGCGTTCGTT CGAAGGCGAT
CCGCAGCGCG CGGCGTTGCT GGCAGGGGCG TTCATTCGTG GGATGAACGC CACCGGTATG
GCTGCCACCG GCAAGCATTT TCCCGGTCAC GGCTGGGCTG AAGCCGATTC TCATGTGGCT
ATCCCGAATG ACGAGCGCAG CCTGGAAGAG ATCCGCGCCA ATGATCTGGT GCCGTTTGCA
CGCCTGAGTC AGCAGCTGGC TGCAGTGATG CCGGCGCATG TCATCTACCC GAAAGTCGAT
TCGCAGCCCG CTGGCTTTTC AAGGCGCTGG CTGCAGGACA TTCTGCGCGA CGAACTGCAA
TTTGACGGTG TTATTTTCAG TGACGACCTG TCGATGGCCG GCGCTCATGT CGTCGGGGAT
GCGGCCAGCC GTATCGAGGC AGCGCTGACA GCCGGATGCG ACATGGGCCT GGTGTGCAAC
GACCGCGCGG CCGCAGAGCT TGCGCTGGGC GCTGCGCAGC GCCTGAAGGT CAAGCCTTCG
CCACGTATCG CCCGTATGCG CGGTCTGGCG TCGGCCAGTA CCGACTATCG GCAACACCCG
CGCTGGCAGG CCGCGCTCCA GGCTCTGCGC GCTGCTCAAC TGATCGATTA A
|
|---|
| Protein sequence | MSSGLQGSLM VDVAGTWLTS EDRQFLRQPE VGGLIIFARN IEHPRQVREL SAAIRAVRPD
LLLAVDQEGG RVQRLREGFV RLPPMRAIAD KPDAELLAEH CGWLMATEVL AVGLDLSFAP
VLDLDYQRSA VVGTRSFEGD PQRAALLAGA FIRGMNATGM AATGKHFPGH GWAEADSHVA
IPNDERSLEE IRANDLVPFA RLSQQLAAVM PAHVIYPKVD SQPAGFSRRW LQDILRDELQ
FDGVIFSDDL SMAGAHVVGD AASRIEAALT AGCDMGLVCN DRAAAELALG AAQRLKVKPS
PRIARMRGLA SASTDYRQHP RWQAALQALR AAQLID
|
|---|
| |