Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3278 |
Symbol | |
ID | 3368805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3926095 |
End bp | 3926880 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653629 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_236348 |
Protein GI | 66046507 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCAGTG CCAATCCGCC TGTCGGCCCA GCAACACCTG TGTCCGCCAG TGTTTCATTG AATGTACTGA CCATGAACAT GCACATGGGC TTTGGCATTT TCAATCGCCG CTTCATTCTG CCGGAGTTGC GTGAAGCTGT GCGCACTGTA TCGGCCGATA TTGTGTTTCT TCAGGAAGTG CACGGCGAAC AGCAGAGCCA CGCGCGCAGG GTCAAGGACT GGCCGACGAT TTCGCAGTAC GAGTTTCTGG CCGACAGCAT GTGGAATGAT TTTGCCTACG GCCGCAATGC GGTGTATCCG GATGGCGATC ATGGCAACGC GTTGCTGTCC AAATACCCGA TCATCCAGCA TGAAAACCTC GACATTTCCA TTCATGGCAC CGAGCAGCGC GGGTTGTTGC ACTGCATTCT CGACGTGCCA CATGCGGGCC GGGTACATGC GATCTGTGTG CATTTGGGGT TGCGTGAAAG CCATCGGCGT CAACAGCTCA AACTGCTTAA CGAGCTGATG GCACGTATTC CCGAGGGCGA GCCGGTGATC GTTGCCGGTG ACTTCAATGA CTGGCGCCAG CGCGCCGATG CGTCGCTGCA GGGCAGTGGG CTGCATGAGG TTTTCGTCGA GCGCTTCGGG GCGCCAGCCA AAAGCTTTCC GGCCCGTTGG CCCTTGCTCT GCCTGGACCG GATCTATGTC CGCAATGCGA CCTCGCACCG GCCGAAAGTG TTGTCCAGCC GACCGTGGTC GCACCTTTCC GATCATGCAC CGCTGGCGGT GGAGTTGACC TTATGA
|
Protein sequence | MTSANPPVGP ATPVSASVSL NVLTMNMHMG FGIFNRRFIL PELREAVRTV SADIVFLQEV HGEQQSHARR VKDWPTISQY EFLADSMWND FAYGRNAVYP DGDHGNALLS KYPIIQHENL DISIHGTEQR GLLHCILDVP HAGRVHAICV HLGLRESHRR QQLKLLNELM ARIPEGEPVI VAGDFNDWRQ RADASLQGSG LHEVFVERFG APAKSFPARW PLLCLDRIYV RNATSHRPKV LSSRPWSHLS DHAPLAVELT L
|
| |