| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3271 |
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| Symbol | |
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| ID | 3368798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3917394 |
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| End bp | 3918896 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653622 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_236341 |
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| Protein GI | 66046500 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.488043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGT CACCGGTGAT CGGCCACTAC ATCAACGGAC ACCTGAGCAA TGGCGAAGGT
GAGCGTTACA GCGAGGTCTT CAACCCGGCA ATCGGCACGG TCCAGGCGCG CGTTGCGCTG
GCCAGTGTGA AGACCGTGGA TGAAGCGGTT GCGGCGGCCA AAGCGGCGTT TCCGGCCTGG
GCCGAGCAGT CCTCGTTGCG CCGGGCGCGG GTGATGTTCA AGTTCAAGGA GCTGCTGGAC
CAGCACCACG ATGAACTGGC GCAGATCATT TGCCGCGAGC ACGGCAAGGT GTTGTCCGAC
GCGCGCGGTG AAGTGGTGCG CGGTATCGAG ATCGTCGAAT TTGCCTGCGG TGCGCCCAGC
CTGTTGAAGA GCGATTTCAG CGACAACATC GGCGGCGGTA TCGATAACTG GAACCTGCGT
CAGCCACTGG GCGTCTGCGC CGGGGTCACG CCGTTCAACT TTCCGGTCAT GGTGCCCTTG
TGGATGATTC CCATGGCGCT GGTGACCGGC AACTGCTTCA TCCTCAAACC CTCGGAACGC
GATCCGTCGG CCAGCCTGCT GATGGCGCGC CTGCTCAAGG AAGCCGGCCT GCCCGATGGC
GTCTTCAATG TGGTGCAGGG CGACAAGGTG GCGGTCGATG CGTTGCTGCA GCACCCTGAC
ATCGAGGCCA TTTCCTTCGT CGGCTCGACC CCGATCGCTG AATACATCCA TCAGCAAGGC
ACGGCCCACG GCAAGCGCGT GCAGGCGCTG GGTGGGGCCA AGAACCATAT GATCGTGATG
CCCGACGCTG ATCTGGATCA GGCCGCCGAC GCCTTGATCG GGGCGGCCTA TGGCTCGGCA
GGGGAGCGCT GCATGGCGAT TTCGATTGCC GTGGTGGTCG GCGATGTCGG CCAGCGCCTC
GTCGACAAGC TGCTACCGCG CATCGACCAG CTCAAGGTCG GCAACGGCAT GCAGGCCGAT
TCGGACATGG GACCGCTGGT CACCGCCGTG CACAAGGCCA AGGTCGAGGG TTTCATCGAT
CAGGGCGTCA AAGAGGGCGC CAGGCTGCTC GTTGATGGTC GCAACTTCAA GGTGCCGGGT
GCCGAGCAGG GCTTTTTCGT TGGCGCGACG CTGTTCGACC ACGTCACGCC GCAGATGCAG
ATCTACAAGG AGGAAATCTT CGGCCCGGTG CTGGGCATTG TGCACGTTGC GGATTTTGCC
AGTGCCGTGG CGCTGATCAA TGCCCACGAG TTCGGCAATG GCGTGTCGTG CTTCACCAGC
GATGGCGGCG TGGCGCGTGC ATTCGCTCGC AGCATCAAGG TCGGCATGGT CGGCATCAAC
GTGCCGATCC CGGTGCCCAT GGCCTGGCAT TCGTTTGGTG GCTGGAAGCG TTCGCTGTTC
GGTGATCATC ACGCCTACGG CGAAGAAGGC CTGCGTTTTT ACAGCCGCTA CAAAAGCGTC
ATGCAGCGCT GGCCGGACAG CATCGCCAAA GGGCCCGAGT TCAGTATGCC GACCGCCAAA
TAG
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| Protein sequence | MNESPVIGHY INGHLSNGEG ERYSEVFNPA IGTVQARVAL ASVKTVDEAV AAAKAAFPAW
AEQSSLRRAR VMFKFKELLD QHHDELAQII CREHGKVLSD ARGEVVRGIE IVEFACGAPS
LLKSDFSDNI GGGIDNWNLR QPLGVCAGVT PFNFPVMVPL WMIPMALVTG NCFILKPSER
DPSASLLMAR LLKEAGLPDG VFNVVQGDKV AVDALLQHPD IEAISFVGST PIAEYIHQQG
TAHGKRVQAL GGAKNHMIVM PDADLDQAAD ALIGAAYGSA GERCMAISIA VVVGDVGQRL
VDKLLPRIDQ LKVGNGMQAD SDMGPLVTAV HKAKVEGFID QGVKEGARLL VDGRNFKVPG
AEQGFFVGAT LFDHVTPQMQ IYKEEIFGPV LGIVHVADFA SAVALINAHE FGNGVSCFTS
DGGVARAFAR SIKVGMVGIN VPIPVPMAWH SFGGWKRSLF GDHHAYGEEG LRFYSRYKSV
MQRWPDSIAK GPEFSMPTAK
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