Gene Psyr_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3269 
Symbol 
ID3368796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3914548 
End bp3916485 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content61% 
IMG OID637653620 
Productpyruvate decarboxylase:pyruvate decarboxylase 
Protein accessionYP_236339 
Protein GI66046498 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3962] Acetolactate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.149274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.620007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAA CCCGACTGAC CATGGCCCAG GCCCTGGTGA AGTTTCTCGA TAACCAGTAC 
GTCGAAGTCG ATGGCGTACA GAGCAAATTC GTCGCTGGCA TCTTCACCAT TTTCGGGCAT
GGCAACGTGC TGGGGCTTGG GCAGGCGCTG GAGCAGGACA GCGGCGACCT GGTGGTCCAT
CAGGGCCGTA ACGAGCAGGG CATGTGCCAC GCCGCCATCG GTTTTGCCAA GCAGCACCTG
CGTCGCAAGA TCTACGCGTG CAGTTCATCG GTCGGCCCTG GCGCGGCGAA CATGGTCACC
GCTGCGGCAA CGGCCTCGGC CAACCGCATT CCGTTGCTGC TGTTGCCGGG CGATGTCTAC
GCCAGCCGCC AGCCCGATCC GGTGCTGCAG CAGATCGAGC AGTTTCACGA CCTGAGCATC
AGCACCAACG ACGCGTTCAA GGCGGTGAGC AAATACTGGG ACCGTATCAA CCGTCCCGAG
CAGTTGATGA GCGCTGCGCT CAATGCCATG CGTGTACTGA CCGACCCGGC CGATACGGGT
GCCGTTACCC TGGCGCTGCC TCAGGATGTG CAGGCTGAAG CCTACGACTA CCCGGACAGC
TTTCTGCAAA AACGCGTGCA CCGTATCGAC CGGCGTCCGC CAAGCAAGGC CATGCTTGAC
GACGCGTTGC AACTACTTGT CGGCAAGCGC AAGCCGTTGC TGATCTGCGG CGGCGGGGTG
CGTTACTCCG GTGCGGCGGA TGCCTTGCAA GCCTTTGCCG AGCGCTTCGA TATCCCGTTC
GCCGAAACCC AGGCCGGCAA GAGTGCCATC GTTTCGGCGC ACCCGTTGAA CATGGGCGGC
ATCGGCGAAA CCGGCACGCT GGCAGCCAAT CGGCTGGCCA AAGAGGCTGA CCTGATCATC
GGCGTCGGCA CCCGTTACAG CGATTTCACC ACCGCGTCGA AATGGCTGTT CCAGAACCCG
GATGTGCAGT TTCTCAACCT CAATGTCGGT GCCTTCGATG TGCAGAAACT GGACGGTGTG
CAGGTGCTGG CTGATGCGCA GACGGCATTG CAGGCGCTGA CCGAAAGCCT GCAAGCCAGA
GGTTATCGTG CGGCCTGGGG CGATGCACCG CAATCGGCAC GTGCCGAGCT GCATGCCGAG
GTGGATCGCC TGTACGCGGT CGAGTACCAG AACGAGGATT TTGTCCCGGA AATCAACGAT
CACCTGGACC CTGCGGTGCT GCGCGAGTTC ATCGAGCTGA CCGGTTCGTG CCTGACTCAG
AGTGGTGTGT TGGGCATCCT CAACCAGAGC CTGCCTGCCG ATGCGGTGAT CGTTGCAGCA
GCGGGCAGCT TGCCGGGTGA TCTGCAGCGC GCCTGGCGCA GTACCGGAGT AGATACCTAT
CACGTCGAAT ACGGTTATTC GTGCATGGGT TATGAGGTCA ACGCCGCACT GGGCGTGAAG
CTTGCGGCGC CGCATCGGGA AGTGTTTGCA CTGGTGGGTG ACGGCTCTTA CATGATGCTT
CATTCCGAGC TGGCGACCTC CATCCAGGAG CGGCGCAAGA TCAACGTTGT GTTGCTGGAC
AATATGACCT TCGGCTGCAT CAACAACCTG CAGATGGAGC ACGGCATGAA CAGCTTCGGC
ACTGAGTTCC GTTTCCGCAA TCCGGACACA GGCAGGCTCG ACGGTGACTT CGTGCCGGTG
GATTTCGCCA TGAGTGCTGC TGCCTATGGC TGCAAGACTT ACAAGGTGAA TACGGCCGAA
CAACTGCGCA ACGCACTGGC CGATGCGCAA CGTCAGACGG TGTCGACGCT GATCGACATC
AAGGTCCTGC CCAAGACCAT GATCCACAAA TACCTGTCGT GGTGGCGTGT CGGGGTTGCC
GAAGTGTCGA CCACCGGCAC CACCGCTCAG GTGTACGAGA AGCTCAACCG CGAGCTGGCC
AAGGCTCGCC AGTACTGA
 
Protein sequence
MSTTRLTMAQ ALVKFLDNQY VEVDGVQSKF VAGIFTIFGH GNVLGLGQAL EQDSGDLVVH 
QGRNEQGMCH AAIGFAKQHL RRKIYACSSS VGPGAANMVT AAATASANRI PLLLLPGDVY
ASRQPDPVLQ QIEQFHDLSI STNDAFKAVS KYWDRINRPE QLMSAALNAM RVLTDPADTG
AVTLALPQDV QAEAYDYPDS FLQKRVHRID RRPPSKAMLD DALQLLVGKR KPLLICGGGV
RYSGAADALQ AFAERFDIPF AETQAGKSAI VSAHPLNMGG IGETGTLAAN RLAKEADLII
GVGTRYSDFT TASKWLFQNP DVQFLNLNVG AFDVQKLDGV QVLADAQTAL QALTESLQAR
GYRAAWGDAP QSARAELHAE VDRLYAVEYQ NEDFVPEIND HLDPAVLREF IELTGSCLTQ
SGVLGILNQS LPADAVIVAA AGSLPGDLQR AWRSTGVDTY HVEYGYSCMG YEVNAALGVK
LAAPHREVFA LVGDGSYMML HSELATSIQE RRKINVVLLD NMTFGCINNL QMEHGMNSFG
TEFRFRNPDT GRLDGDFVPV DFAMSAAAYG CKTYKVNTAE QLRNALADAQ RQTVSTLIDI
KVLPKTMIHK YLSWWRVGVA EVSTTGTTAQ VYEKLNRELA KARQY