Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3269 |
Symbol | |
ID | 3368796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3914548 |
End bp | 3916485 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653620 |
Product | pyruvate decarboxylase:pyruvate decarboxylase |
Protein accession | YP_236339 |
Protein GI | 66046498 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3962] Acetolactate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.149274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.620007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAA CCCGACTGAC CATGGCCCAG GCCCTGGTGA AGTTTCTCGA TAACCAGTAC GTCGAAGTCG ATGGCGTACA GAGCAAATTC GTCGCTGGCA TCTTCACCAT TTTCGGGCAT GGCAACGTGC TGGGGCTTGG GCAGGCGCTG GAGCAGGACA GCGGCGACCT GGTGGTCCAT CAGGGCCGTA ACGAGCAGGG CATGTGCCAC GCCGCCATCG GTTTTGCCAA GCAGCACCTG CGTCGCAAGA TCTACGCGTG CAGTTCATCG GTCGGCCCTG GCGCGGCGAA CATGGTCACC GCTGCGGCAA CGGCCTCGGC CAACCGCATT CCGTTGCTGC TGTTGCCGGG CGATGTCTAC GCCAGCCGCC AGCCCGATCC GGTGCTGCAG CAGATCGAGC AGTTTCACGA CCTGAGCATC AGCACCAACG ACGCGTTCAA GGCGGTGAGC AAATACTGGG ACCGTATCAA CCGTCCCGAG CAGTTGATGA GCGCTGCGCT CAATGCCATG CGTGTACTGA CCGACCCGGC CGATACGGGT GCCGTTACCC TGGCGCTGCC TCAGGATGTG CAGGCTGAAG CCTACGACTA CCCGGACAGC TTTCTGCAAA AACGCGTGCA CCGTATCGAC CGGCGTCCGC CAAGCAAGGC CATGCTTGAC GACGCGTTGC AACTACTTGT CGGCAAGCGC AAGCCGTTGC TGATCTGCGG CGGCGGGGTG CGTTACTCCG GTGCGGCGGA TGCCTTGCAA GCCTTTGCCG AGCGCTTCGA TATCCCGTTC GCCGAAACCC AGGCCGGCAA GAGTGCCATC GTTTCGGCGC ACCCGTTGAA CATGGGCGGC ATCGGCGAAA CCGGCACGCT GGCAGCCAAT CGGCTGGCCA AAGAGGCTGA CCTGATCATC GGCGTCGGCA CCCGTTACAG CGATTTCACC ACCGCGTCGA AATGGCTGTT CCAGAACCCG GATGTGCAGT TTCTCAACCT CAATGTCGGT GCCTTCGATG TGCAGAAACT GGACGGTGTG CAGGTGCTGG CTGATGCGCA GACGGCATTG CAGGCGCTGA CCGAAAGCCT GCAAGCCAGA GGTTATCGTG CGGCCTGGGG CGATGCACCG CAATCGGCAC GTGCCGAGCT GCATGCCGAG GTGGATCGCC TGTACGCGGT CGAGTACCAG AACGAGGATT TTGTCCCGGA AATCAACGAT CACCTGGACC CTGCGGTGCT GCGCGAGTTC ATCGAGCTGA CCGGTTCGTG CCTGACTCAG AGTGGTGTGT TGGGCATCCT CAACCAGAGC CTGCCTGCCG ATGCGGTGAT CGTTGCAGCA GCGGGCAGCT TGCCGGGTGA TCTGCAGCGC GCCTGGCGCA GTACCGGAGT AGATACCTAT CACGTCGAAT ACGGTTATTC GTGCATGGGT TATGAGGTCA ACGCCGCACT GGGCGTGAAG CTTGCGGCGC CGCATCGGGA AGTGTTTGCA CTGGTGGGTG ACGGCTCTTA CATGATGCTT CATTCCGAGC TGGCGACCTC CATCCAGGAG CGGCGCAAGA TCAACGTTGT GTTGCTGGAC AATATGACCT TCGGCTGCAT CAACAACCTG CAGATGGAGC ACGGCATGAA CAGCTTCGGC ACTGAGTTCC GTTTCCGCAA TCCGGACACA GGCAGGCTCG ACGGTGACTT CGTGCCGGTG GATTTCGCCA TGAGTGCTGC TGCCTATGGC TGCAAGACTT ACAAGGTGAA TACGGCCGAA CAACTGCGCA ACGCACTGGC CGATGCGCAA CGTCAGACGG TGTCGACGCT GATCGACATC AAGGTCCTGC CCAAGACCAT GATCCACAAA TACCTGTCGT GGTGGCGTGT CGGGGTTGCC GAAGTGTCGA CCACCGGCAC CACCGCTCAG GTGTACGAGA AGCTCAACCG CGAGCTGGCC AAGGCTCGCC AGTACTGA
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Protein sequence | MSTTRLTMAQ ALVKFLDNQY VEVDGVQSKF VAGIFTIFGH GNVLGLGQAL EQDSGDLVVH QGRNEQGMCH AAIGFAKQHL RRKIYACSSS VGPGAANMVT AAATASANRI PLLLLPGDVY ASRQPDPVLQ QIEQFHDLSI STNDAFKAVS KYWDRINRPE QLMSAALNAM RVLTDPADTG AVTLALPQDV QAEAYDYPDS FLQKRVHRID RRPPSKAMLD DALQLLVGKR KPLLICGGGV RYSGAADALQ AFAERFDIPF AETQAGKSAI VSAHPLNMGG IGETGTLAAN RLAKEADLII GVGTRYSDFT TASKWLFQNP DVQFLNLNVG AFDVQKLDGV QVLADAQTAL QALTESLQAR GYRAAWGDAP QSARAELHAE VDRLYAVEYQ NEDFVPEIND HLDPAVLREF IELTGSCLTQ SGVLGILNQS LPADAVIVAA AGSLPGDLQR AWRSTGVDTY HVEYGYSCMG YEVNAALGVK LAAPHREVFA LVGDGSYMML HSELATSIQE RRKINVVLLD NMTFGCINNL QMEHGMNSFG TEFRFRNPDT GRLDGDFVPV DFAMSAAAYG CKTYKVNTAE QLRNALADAQ RQTVSTLIDI KVLPKTMIHK YLSWWRVGVA EVSTTGTTAQ VYEKLNRELA KARQY
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