Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3267 |
Symbol | |
ID | 3368794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3912557 |
End bp | 3913417 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653618 |
Product | AP endonuclease |
Protein accession | YP_236337 |
Protein GI | 66046496 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTG CATTGGACCC TTACATGTAT CGCCATCTGT CTCTGGGGGC AATGGTCGAT AAAACCGCCG AGCTGGGTTA TGACTACATC GAGCTGTCGC CGCGTGAAGA TTTCATGCCG TTTTACAAAT ACCCACGGGT GGATCGGGCG CGGATCAGGG AGTTTCGCAA GGCCCTGAGC GATGCCGGGG TGAAACTCTC CTCGTTGCTG CCGCTGTACC ACTGGGCTGC GCCAGATGAA GACCTGCGTA TTGCAGCGGT TCGCAACTGG AAACGTGCCA TTCAGGTCGC CGTTGAAATG GACTGCGACC TGATGAATAC CGAGTTCAGC GGGCAATCCG ACCATGCGCT GGTCTGTGAA AACCAGTTTA TGAAATCCAT GGATGAACTG ATGCCGCATT TCGAGCGCGA AGGCATAAAG CTCGATATTC AGGCGCACCC CTACGATTTC TGCGAGCGCA ACAACGAGTC GGTGGATATC ATTCGCGGGC TCGATCGGGA CTGGATCAAC TACCTGTACG CGGCACCACA CACTTTCTTC TACGACGATG GCGTTGGCGA TATCGCTTCG ATGCTGCGCT ATGCCGGCGA CAAGCTCACG CATCTGATCA TTGCCGACAC CTATAATCAC CGTGCTTCTT CCAACCTGCG CTACATCGTC AACCCGCCCG GCGTGACGGC GACGGTGCAT CAGCACCTGG ACATCGGCCA GGGCGAGGTG AACTGGGAAG CATTTTTCTC GACGTTGCGG GATATCAATT TCGACGGTAT TGCCACAGTG GCTGTCTTTG CCTGGGAGGA GCGCGCAGAT GAATCGAGCC GATTCATGCT GGAGCGGGTC AAAAGCGAGC TGTTTCGTTG A
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Protein sequence | MRIALDPYMY RHLSLGAMVD KTAELGYDYI ELSPREDFMP FYKYPRVDRA RIREFRKALS DAGVKLSSLL PLYHWAAPDE DLRIAAVRNW KRAIQVAVEM DCDLMNTEFS GQSDHALVCE NQFMKSMDEL MPHFEREGIK LDIQAHPYDF CERNNESVDI IRGLDRDWIN YLYAAPHTFF YDDGVGDIAS MLRYAGDKLT HLIIADTYNH RASSNLRYIV NPPGVTATVH QHLDIGQGEV NWEAFFSTLR DINFDGIATV AVFAWEERAD ESSRFMLERV KSELFR
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