Gene Psyr_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3267 
Symbol 
ID3368794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3912557 
End bp3913417 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content56% 
IMG OID637653618 
ProductAP endonuclease 
Protein accessionYP_236337 
Protein GI66046496 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTG CATTGGACCC TTACATGTAT CGCCATCTGT CTCTGGGGGC AATGGTCGAT 
AAAACCGCCG AGCTGGGTTA TGACTACATC GAGCTGTCGC CGCGTGAAGA TTTCATGCCG
TTTTACAAAT ACCCACGGGT GGATCGGGCG CGGATCAGGG AGTTTCGCAA GGCCCTGAGC
GATGCCGGGG TGAAACTCTC CTCGTTGCTG CCGCTGTACC ACTGGGCTGC GCCAGATGAA
GACCTGCGTA TTGCAGCGGT TCGCAACTGG AAACGTGCCA TTCAGGTCGC CGTTGAAATG
GACTGCGACC TGATGAATAC CGAGTTCAGC GGGCAATCCG ACCATGCGCT GGTCTGTGAA
AACCAGTTTA TGAAATCCAT GGATGAACTG ATGCCGCATT TCGAGCGCGA AGGCATAAAG
CTCGATATTC AGGCGCACCC CTACGATTTC TGCGAGCGCA ACAACGAGTC GGTGGATATC
ATTCGCGGGC TCGATCGGGA CTGGATCAAC TACCTGTACG CGGCACCACA CACTTTCTTC
TACGACGATG GCGTTGGCGA TATCGCTTCG ATGCTGCGCT ATGCCGGCGA CAAGCTCACG
CATCTGATCA TTGCCGACAC CTATAATCAC CGTGCTTCTT CCAACCTGCG CTACATCGTC
AACCCGCCCG GCGTGACGGC GACGGTGCAT CAGCACCTGG ACATCGGCCA GGGCGAGGTG
AACTGGGAAG CATTTTTCTC GACGTTGCGG GATATCAATT TCGACGGTAT TGCCACAGTG
GCTGTCTTTG CCTGGGAGGA GCGCGCAGAT GAATCGAGCC GATTCATGCT GGAGCGGGTC
AAAAGCGAGC TGTTTCGTTG A
 
Protein sequence
MRIALDPYMY RHLSLGAMVD KTAELGYDYI ELSPREDFMP FYKYPRVDRA RIREFRKALS 
DAGVKLSSLL PLYHWAAPDE DLRIAAVRNW KRAIQVAVEM DCDLMNTEFS GQSDHALVCE
NQFMKSMDEL MPHFEREGIK LDIQAHPYDF CERNNESVDI IRGLDRDWIN YLYAAPHTFF
YDDGVGDIAS MLRYAGDKLT HLIIADTYNH RASSNLRYIV NPPGVTATVH QHLDIGQGEV
NWEAFFSTLR DINFDGIATV AVFAWEERAD ESSRFMLERV KSELFR