Gene Psyr_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3260 
Symbol 
ID3368787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3903078 
End bp3904562 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content57% 
IMG OID637653611 
Producthypothetical protein 
Protein accessionYP_236330 
Protein GI66046489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.18986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AACGGAGTTT TCAACAGTCA GCAGTCCTTT CAGATGTGGT CACGCGGCGC 
GTGACGGCGC GAGTAGGCAT TTTCTTCGAC GGTACGGGAA ATAATCGCTT CAATAGTCAG
ATCGGGGCCG ACTGCCAGGC ATTGATCGAG ATCAATGAGG GGCAGCACAT TAAAGCGTGT
GCGGGTCGTC ATGTGCAGCC TGGCAGTAGT TACAATAATG ATCCGAGCAA TATAGCCAGA
CTGGTCGATA TCTACCGCCT GCAACCTGTT GCCGAAAATG ACGGTGACGG CCTGAAGGTG
TATTACCCGA TCTATGTAAG CGGGGCCGGC ACTACTTCCG GTGGACGTGA TTCGGTATGG
CCGGGGCAGA GTTTCGGTCG CGGGGCAACC GGTGTGATCT CCAAGGTGGA AAACGCATTC
AAAAAGCTGG CGTCGGTATT GAAGGCGTTC CCCCGCGACA ACCCCGATTG TGTTCTGGAA
GCGCTGGAAC TGGACGTGTT CGGCTTCAGT CGAGGTGCAG CGTCGGCCAG GCATCTGGTC
AATGAAATTC TCAAGCAGCG TTCGGGCATG CTCGAGCCGA TACTCGAAAG CCGCAAGGTC
AGGTTGAGCG ACCGTTTCAG CTGGAGCAAC GGCAGCGTAC GGCTCAAGGT TATCGGTCTG
TTCGACACCG TTGCAGCCAT CGGCAGCTTC AAGGATATGG GCAATACCCG CGATGCGAGC
AACAGGAGGG TCAATCTGTA CCTGCCTCCG GGGTGCGCGC AGCAGGTGTT GCACCTGGTG
GCCCGCGATG AATCCCGGCG CAACTTTGCG TTGAACAGCA TCCTGCCCGT GTGGCCCCGG
GAAATCGTTC TGCCCGGTGC ACATTCCGAT ATCGGTGGTG GTTATCCTCC ACAGATGGAA
GAAAACGTAC TGCTCACGCG CCCTCGCGGC AGTGTGGTCA GCCGTGGCAG CCCGTACGAG
TCGGCACCGA GCTGGAAGGA GGCACAGGCT GAATTAAGCC GAATGAATCG CGATCACTGG
ATCGACCCGC TCGATAGCCA GGCCTGGCTG AGGGTTCAGG CATGCGAGAG CAAGTGTTAT
CCGTGCAGGA AAAGTTTGAA TGGCATAAGT ACGGTCGTTG CCGCAGTGGG CATGAGCCGT
CAGGTGTTTG GCCACCTGTC GAGGGTATCG TTACTGATCA TGCACACACT GGCGTGTGAC
GAGGGCGTGC CTTTCAACCC GGTGCCACAA GCACCTGAAT TCCAGCTTCC TCCCGAGCTT
GAGAACATTT CTACCCGGTT GATTGATTAT GCGCGAGGCG GGTCTTACCT GCTGGACAGC
CATGAAGAGG CATTACTGCG CTGGCGCTAC ATCCATCAGT CTGCGCACTG GAATGCAGTA
GTCGGCAGAG TGGGTACTTT TGGCGACGCT GTTTTCGTCC ACGCGCCACA GCCAGGCGGC
CGGATATTGC ATCCCAATAT CGGCCAGCCC GGTTATCCGC AATAG
 
Protein sequence
MSDKRSFQQS AVLSDVVTRR VTARVGIFFD GTGNNRFNSQ IGADCQALIE INEGQHIKAC 
AGRHVQPGSS YNNDPSNIAR LVDIYRLQPV AENDGDGLKV YYPIYVSGAG TTSGGRDSVW
PGQSFGRGAT GVISKVENAF KKLASVLKAF PRDNPDCVLE ALELDVFGFS RGAASARHLV
NEILKQRSGM LEPILESRKV RLSDRFSWSN GSVRLKVIGL FDTVAAIGSF KDMGNTRDAS
NRRVNLYLPP GCAQQVLHLV ARDESRRNFA LNSILPVWPR EIVLPGAHSD IGGGYPPQME
ENVLLTRPRG SVVSRGSPYE SAPSWKEAQA ELSRMNRDHW IDPLDSQAWL RVQACESKCY
PCRKSLNGIS TVVAAVGMSR QVFGHLSRVS LLIMHTLACD EGVPFNPVPQ APEFQLPPEL
ENISTRLIDY ARGGSYLLDS HEEALLRWRY IHQSAHWNAV VGRVGTFGDA VFVHAPQPGG
RILHPNIGQP GYPQ