Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3260 |
Symbol | |
ID | 3368787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3903078 |
End bp | 3904562 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637653611 |
Product | hypothetical protein |
Protein accession | YP_236330 |
Protein GI | 66046489 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.18986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA AACGGAGTTT TCAACAGTCA GCAGTCCTTT CAGATGTGGT CACGCGGCGC GTGACGGCGC GAGTAGGCAT TTTCTTCGAC GGTACGGGAA ATAATCGCTT CAATAGTCAG ATCGGGGCCG ACTGCCAGGC ATTGATCGAG ATCAATGAGG GGCAGCACAT TAAAGCGTGT GCGGGTCGTC ATGTGCAGCC TGGCAGTAGT TACAATAATG ATCCGAGCAA TATAGCCAGA CTGGTCGATA TCTACCGCCT GCAACCTGTT GCCGAAAATG ACGGTGACGG CCTGAAGGTG TATTACCCGA TCTATGTAAG CGGGGCCGGC ACTACTTCCG GTGGACGTGA TTCGGTATGG CCGGGGCAGA GTTTCGGTCG CGGGGCAACC GGTGTGATCT CCAAGGTGGA AAACGCATTC AAAAAGCTGG CGTCGGTATT GAAGGCGTTC CCCCGCGACA ACCCCGATTG TGTTCTGGAA GCGCTGGAAC TGGACGTGTT CGGCTTCAGT CGAGGTGCAG CGTCGGCCAG GCATCTGGTC AATGAAATTC TCAAGCAGCG TTCGGGCATG CTCGAGCCGA TACTCGAAAG CCGCAAGGTC AGGTTGAGCG ACCGTTTCAG CTGGAGCAAC GGCAGCGTAC GGCTCAAGGT TATCGGTCTG TTCGACACCG TTGCAGCCAT CGGCAGCTTC AAGGATATGG GCAATACCCG CGATGCGAGC AACAGGAGGG TCAATCTGTA CCTGCCTCCG GGGTGCGCGC AGCAGGTGTT GCACCTGGTG GCCCGCGATG AATCCCGGCG CAACTTTGCG TTGAACAGCA TCCTGCCCGT GTGGCCCCGG GAAATCGTTC TGCCCGGTGC ACATTCCGAT ATCGGTGGTG GTTATCCTCC ACAGATGGAA GAAAACGTAC TGCTCACGCG CCCTCGCGGC AGTGTGGTCA GCCGTGGCAG CCCGTACGAG TCGGCACCGA GCTGGAAGGA GGCACAGGCT GAATTAAGCC GAATGAATCG CGATCACTGG ATCGACCCGC TCGATAGCCA GGCCTGGCTG AGGGTTCAGG CATGCGAGAG CAAGTGTTAT CCGTGCAGGA AAAGTTTGAA TGGCATAAGT ACGGTCGTTG CCGCAGTGGG CATGAGCCGT CAGGTGTTTG GCCACCTGTC GAGGGTATCG TTACTGATCA TGCACACACT GGCGTGTGAC GAGGGCGTGC CTTTCAACCC GGTGCCACAA GCACCTGAAT TCCAGCTTCC TCCCGAGCTT GAGAACATTT CTACCCGGTT GATTGATTAT GCGCGAGGCG GGTCTTACCT GCTGGACAGC CATGAAGAGG CATTACTGCG CTGGCGCTAC ATCCATCAGT CTGCGCACTG GAATGCAGTA GTCGGCAGAG TGGGTACTTT TGGCGACGCT GTTTTCGTCC ACGCGCCACA GCCAGGCGGC CGGATATTGC ATCCCAATAT CGGCCAGCCC GGTTATCCGC AATAG
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Protein sequence | MSDKRSFQQS AVLSDVVTRR VTARVGIFFD GTGNNRFNSQ IGADCQALIE INEGQHIKAC AGRHVQPGSS YNNDPSNIAR LVDIYRLQPV AENDGDGLKV YYPIYVSGAG TTSGGRDSVW PGQSFGRGAT GVISKVENAF KKLASVLKAF PRDNPDCVLE ALELDVFGFS RGAASARHLV NEILKQRSGM LEPILESRKV RLSDRFSWSN GSVRLKVIGL FDTVAAIGSF KDMGNTRDAS NRRVNLYLPP GCAQQVLHLV ARDESRRNFA LNSILPVWPR EIVLPGAHSD IGGGYPPQME ENVLLTRPRG SVVSRGSPYE SAPSWKEAQA ELSRMNRDHW IDPLDSQAWL RVQACESKCY PCRKSLNGIS TVVAAVGMSR QVFGHLSRVS LLIMHTLACD EGVPFNPVPQ APEFQLPPEL ENISTRLIDY ARGGSYLLDS HEEALLRWRY IHQSAHWNAV VGRVGTFGDA VFVHAPQPGG RILHPNIGQP GYPQ
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