| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3252 |
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| Symbol | |
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| ID | 3368779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3895808 |
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| End bp | 3898726 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653603 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_236322 |
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| Protein GI | 66046481 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.295044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGA TAGTTCTACT GCTTCTGCCT TTCATCGGCA GCTGTCTGGC GGCCTTTTTG
CCGCACAACG CGCGTAACGC GGAATCATTT CTGGCCGGTC TGATCGCCCT CATCGGCGCT
GTGCAGATGG CCTTGTGGTT CCCGCAGATC GCCGACGGCG GCGTGATTCG TGAAGAGTAT
TTCTGGCTGC CAAGCCTGGG CATGAACTTC GTTCTGCGTA TCGATGGCTT CGCCTGGCTG
TTCTCGATGC TGGTACTGGG CATCGGTGCG CTGGTTTCGC TGTATGCCCG CTATTACATG
TCGCCGGACG ACCCGGTGCC GCGCTTCTTT GCGTTTTTCC TGGCCTTCAT GGGCGCCATG
CTCGGTCTGG TGATGTCCGG CAATCTGATT CAGATCGTAT TTTTCTGGGA GCTGACCAGT
CTTTTCTCGT TCCTGCTGAT CGGCTATTGG CACCATCGGG CCGATGCCCG ACGCGGCGCT
TACATGGCGC TGATGGTTAC CGGCGCGGGC GGTCTGGCGC TGCTGGCAGG CATGATGATC
CTCGGCCATG TGGCCGGCAG TTATGATCTT GACCGTGTTC TGGCCTCCGG CGACGCGATT
CGTGCGCACG CCCTGTACCC GGTGTTACTG ACCCTGATTC TGATCGGCGC ACTGACCAAA
AGCGCCCAGT TCCCGTTCCA TTTCTGGCTG CCGCACGCGA TGGCCGCGCC CACGCCGGTG
TCGGCGTATC TGCACTCGGC AACCATGGTC AAGGCCGGGG TCTTTCTCAT GGCGCGCATG
TGGCCGGCGC TATCCGGCAC CGAGCAATGG TTCTGGATCG TCAGTGGCGC GGGTGCCTGC
ACGCTGATTC TCGGCGCCTA CGCGGCGATC TTCCAGAACG ATCTCAAGGG GCTGCTCGCC
TACTCGACCA TCAGCCACCT GGGCCTGATC ACCCTGCTGC TCGGCCTCAA CAGCCCGCTG
GCTGCGGTGG CCGCGGTGTT CCATATTCTC AACCACGCGA CCTTCAAGGC GTCGCTGTTC
ATGGCCGCCG GCATCATCGA CCACGAGAGC GGGACCCGCG ATATCCGCCG TCTCAGTGGC
CTGATAAGGC TGCTGCCCTA CACCGCGACG CTGGCGATGG TCGCCAGCGC CTCGATGGCC
GGCGTGCCGC TGCTCAACGG CTTTCTGTCC AAGGAAATGT TCTTTGCCGA AACCGTGTTC
ATTTCCGCCA CTGCCTGGGT CGAGATTGCC TTGCCGGTGA TTGCGACCAT CGCCGGGATC
TTCAGCGTTG CCTATTCGCT GCGCTTCACT GTCGATGTGT TTTTCGGTCC GGCGGCCAAG
GATCTGCCCC ACTTGCCCCA CGAACCGCCG CGCTGGATGC GTGCGCCGGT CGAACTGCTG
GTGCTGACGT GTCTGGTGGT GGGGATTTTC CCGGCGCAAT CGGTCGCTCC CCTGCTCGCC
GCCGCTGCGC GCCCCGTTGT CGGTGGAACA CTGCCCGAGT ACAGCCTGGC GATCTGGCAC
GGCTGGAACC TGCCGATGGT CATGAGCCTG GTGGCGATGG CGGGCGGTAT CATTCTGTAC
CTGTTGCTGC GCAAGCCGCT CAAGCACGAG CGCATCACCG CCCCGCCGCT GGTGGGACGC
CTCAATGGCA AGCGCTTTTT CGAGCGCAGT CAGGTGGTGA TGATGCACTG GGCACGCCGT
TTCGAACGCA AGGTCAGCAC TCGCCGCCTG CAGCCACAAC TGTTTCTGCT GGTGCTCGCG
GCGGTACTGG GCGGTTTCAT TCCGATGTAT TTCAGCGGCC TGACCTGGGG CGACCGACCG
AAGATTCCGG GTTCCGGGGT GTTTGTCACG CTGTGGCTGA TCGCGATTGC CTGCGCCATA
GGTGCGGCCT GGCAAGGTAA ATATCACCGT TTGGCGGCAC TGGTCATGGT CAGCGTCTGC
GGGCTGATGA CCTGCATCAC CTTCGTCTGG TTCTCGGCCC CTGATCTGGC GCTGACGCAA
CTGGTCGTGG AGGTGGTGAC CACCGTGCTG ATCCTGCTCG GTCTGCGCTG GCTGCCACGA
CGCAATGAAG ACGTCGCCCC GCTCAGCGCA CGCCTGCGTG CCCGTACCCG GCGCATACGC
GACTTCGGCC TGGCAGTGCT CGTGGGGCTG GGCATGGCGA TACTCTCCTA CGCCATGCTG
ACCCGCCAGA CGCCCAACGC CATCTCGTCC TTCTACCTGA GTCGCGCGCT GCCCCAGGGC
GGCGGCACCA ACGTGGTCAA CGTGATGCTG GTGGATTTCC GCGGCTTCGA TACGTTTGGC
GAAATCACCG TGCTGGCGGC AGTCGCCATG ACAGTGTTCG CCCTGTTGCG ACGCTTCCGT
CCACCGAAGG AAAGCATTCT GCTGCCCGCC CAGCAGCGCC TGCTGGCCCG TGACGTGGTG
ACGGATCTGG TCAACCCGCG CAGCGCCAGC GATACCGCGC TCGGCTTCAT GATGGTTCCG
GCAGCGCTGG TTCGATTGCT GCTGCCGATT GCCTTCATCA TCTCGATGTA CTTGTTCGTC
CGCGGCCACA ACCAGCCCGG CGGTGGGTTT GTCGCCGGGT TGGTGATGTC GGTGGCGTTC
ATCCTGCAAT ACATGGTGGC AGGCACCCAG TGGGTCGAGG CGCAAATGAG CCTGCGCCCG
CTACGCTGGA TGGGCACAGG CCTGTTATGC GCGGTGCTGA CCGGCGCGGG CTCGATGCTG
CTGGGTTATC CGTTCATGAC CACCCACACC GCCCATGTCG ACTTGCCGAT CCTGGGTGAC
ATTCACATCG CCAGCGCGCT GTTCTTCGAT GTCGGCGTGT ACGCCGTGGT GGTCGGCTCG
ACGCTGTTGA TTCTTACCGC ACTGGCGCAC CAGTCGGTGC GCAGCCATCG GCCGACGCAG
TTGCCCAAGC CTGTCGCCAA CCCGCAAGGA ATCCTCTGA
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| Protein sequence | MSLIVLLLLP FIGSCLAAFL PHNARNAESF LAGLIALIGA VQMALWFPQI ADGGVIREEY
FWLPSLGMNF VLRIDGFAWL FSMLVLGIGA LVSLYARYYM SPDDPVPRFF AFFLAFMGAM
LGLVMSGNLI QIVFFWELTS LFSFLLIGYW HHRADARRGA YMALMVTGAG GLALLAGMMI
LGHVAGSYDL DRVLASGDAI RAHALYPVLL TLILIGALTK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGVFLMARM WPALSGTEQW FWIVSGAGAC TLILGAYAAI FQNDLKGLLA
YSTISHLGLI TLLLGLNSPL AAVAAVFHIL NHATFKASLF MAAGIIDHES GTRDIRRLSG
LIRLLPYTAT LAMVASASMA GVPLLNGFLS KEMFFAETVF ISATAWVEIA LPVIATIAGI
FSVAYSLRFT VDVFFGPAAK DLPHLPHEPP RWMRAPVELL VLTCLVVGIF PAQSVAPLLA
AAARPVVGGT LPEYSLAIWH GWNLPMVMSL VAMAGGIILY LLLRKPLKHE RITAPPLVGR
LNGKRFFERS QVVMMHWARR FERKVSTRRL QPQLFLLVLA AVLGGFIPMY FSGLTWGDRP
KIPGSGVFVT LWLIAIACAI GAAWQGKYHR LAALVMVSVC GLMTCITFVW FSAPDLALTQ
LVVEVVTTVL ILLGLRWLPR RNEDVAPLSA RLRARTRRIR DFGLAVLVGL GMAILSYAML
TRQTPNAISS FYLSRALPQG GGTNVVNVML VDFRGFDTFG EITVLAAVAM TVFALLRRFR
PPKESILLPA QQRLLARDVV TDLVNPRSAS DTALGFMMVP AALVRLLLPI AFIISMYLFV
RGHNQPGGGF VAGLVMSVAF ILQYMVAGTQ WVEAQMSLRP LRWMGTGLLC AVLTGAGSML
LGYPFMTTHT AHVDLPILGD IHIASALFFD VGVYAVVVGS TLLILTALAH QSVRSHRPTQ
LPKPVANPQG IL
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