| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3247 |
|---|
| Symbol | |
|---|
| ID | 3368774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3890048 |
|---|
| End bp | 3891187 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637653598 |
|---|
| Product | alkanesulfonate monooxygenase |
|---|
| Protein accession | YP_236317 |
|---|
| Protein GI | 66046476 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03565] alkanesulfonate monooxygenase, FMNH(2)-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0369402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTT TCTGGTTTCT TCCGACTCAC GGCGACGGCC ATTATCTGGG CACGACAAAG
GGCGCACGTC CCGTCACCCT CAACTATTTG AAACAGGTGG CGCAGGCCGC CGATGACCTG
GGTTATTACG GTGTATTGAT CCCCACCGGT CGCTCCTGCG AGGATTCGTG GGTCATCGCC
TCGGCGCTGG TGCCGCTGAC CGAGCGCCTG AGGTATCTGG TGGCGATCCG CCCCGGGATC
ATCTCGCCGA CCGTCTCGGC ACGCATGGCC GCCACGCTGG ATCGTCTTTC CGGCGGCCGG
CTGCTGATCA ACGTGGTGAC CGGTGGCGAC CCGGACGAAA ACCGTGGCGA TGGCAGCTTT
CTCGACCACA GTGAGCGCTA TGAAGTTACC GACGAATTTC TGAAAATCTG GCGCCGGGTC
CTGCAGGGCG AAGCGGTCGA CTTCGAAGGC AAGCACTTGC GCGTGCAGAA CGCCAAGGCG
CTTTACCCGC CGATTCAACA ACCCTACCCG CCGCTGTACT TCGGTGGCTC CTCCGACGCG
GCGCATGACC TTGCGGCCGA TCAGGTGGAC GTGTACCTGA CCTGGGGCGA GCCTCCGGCA
GCCGTAGCGC AGAAGCTCGC CGATGTACGT GAACGGGCAG CGCGCAAGGG ACGCACCGTG
AAGTTCGGCA TTCGCCTGCA CGTGATCGTG CGCGAAACCA GCGAAGAAGC CTGGAAAGCC
GCCAGCACGC TGATCGAACA CATCAGCGAT GACACCATTG CTGCAGCGCA GAAGTCCTTT
TCGCGTTTTG ATTCCGAAGG TCAGCGGCGC ATGGCCGCGC TGCACGACGG GCGCCGCGAC
AACCTGGAGA TCGCGCCCAA CCTGTGGGCC GGTGTCGGCC TGGTGCGCGG CGGTGCAGGC
ACGGCGCTGG TCGGCAATCC CGAAGAGGTC GCGGCACGCA TCAAGGAATA TGCCGACCTG
GGCATCGAGA GCTTCATTTT CTCGGGTTAC CCGCATCTTG AAGAAGCCTA CCGCTTCGCC
GAACTGGTCT TCCCGCTGCT GCCTGAGCCT TACGCCAGCC TCGCCGGGCG CGGCATCACC
AACCTGACGG GCCCGTTCGG CGAAATGATC GCCAACGATC TGCCCCCGCA GGCCAAGTGA
|
|---|
| Protein sequence | MNVFWFLPTH GDGHYLGTTK GARPVTLNYL KQVAQAADDL GYYGVLIPTG RSCEDSWVIA
SALVPLTERL RYLVAIRPGI ISPTVSARMA ATLDRLSGGR LLINVVTGGD PDENRGDGSF
LDHSERYEVT DEFLKIWRRV LQGEAVDFEG KHLRVQNAKA LYPPIQQPYP PLYFGGSSDA
AHDLAADQVD VYLTWGEPPA AVAQKLADVR ERAARKGRTV KFGIRLHVIV RETSEEAWKA
ASTLIEHISD DTIAAAQKSF SRFDSEGQRR MAALHDGRRD NLEIAPNLWA GVGLVRGGAG
TALVGNPEEV AARIKEYADL GIESFIFSGY PHLEEAYRFA ELVFPLLPEP YASLAGRGIT
NLTGPFGEMI ANDLPPQAK
|
|---|
| |