| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3241 |
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| Symbol | |
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| ID | 3368768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3879840 |
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| End bp | 3880772 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637653592 |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | YP_236311 |
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| Protein GI | 66046470 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00457799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGG TATTGGTGCT GGTGGAAAAC CTGGACACGT ATTTGCCGAT TCTTGAAAGC
AGCGGTTTTC AGTTGATTCG CGCCCCGACG GCCGAACTGC GCGCCGCGGC GATTGCCACG
CACGGGCAGA GCATCAGCGC GGTGGTGACA CGCGGGCCGC TGGGATTTTT CGCCGAGGAA
ATGGATGCAC TGCCGCAACT GCGCATCATT TGCGTAAGCG GCGCCGGTTA CGAGAAGGTC
GATCTGCCTG CCGCGCAGGC GCGGGGCATC GTCGTCACCA ATGGTGCAGG CGTCAACGCC
GCCACGGTGG CCGATCATAC GCTGGCGTTG CTGCTGTCTT TGGTGCGCGA CATTCCGCAG
GCCGATGCCT CGGTGCGCCG CAGCGAATGG CGCAAGGTGG TACGCCCGTC ACTGGCAGGC
AAGCGTCTGG GGATCGTCGG GCTGGGAGCG GTGGGGCTGG CGATTGCCAG GCGTGCAGCC
GCTTTCGATA TCGTCATCGG TTACCACAAC CGCAAGCCGC GCAGCGACTG CGATTACACC
TGGCATGCGA CGGCGCAGGC GCTGGCGGCC GCGTCGGATT TTCTGGTCAT CGCCACGCCC
GGTGGCAGCG GCACGCAGCA CCTGATCGAC GCCCGGGTGC TTGAAGCGCT GGGCCCTGAC
GGGTTTCTGG TCAACATTGC CCGTGCCAGC GTGGTGGATA CCCAGGCGTT GGTCAGTGCA
TTGCAGAATG AGCAGATTGC CGGGGCCGCG CTGGACGTGT TCGACGATGA ACCGACGGTG
CCGGATGTGC TCAAGACCCT CGGCAATGTG GTGCTGACAC CGCACGTGGC AGGCCTGTCC
CCCGAGGCCT CGAGAGACAG TGTGCAGAGG GTCAACGATA ACCTGCTGGC GTTTTTTGCC
GGGCAACCGG TGCTGACGCC TGTGACTGAA TGA
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| Protein sequence | MTTVLVLVEN LDTYLPILES SGFQLIRAPT AELRAAAIAT HGQSISAVVT RGPLGFFAEE
MDALPQLRII CVSGAGYEKV DLPAAQARGI VVTNGAGVNA ATVADHTLAL LLSLVRDIPQ
ADASVRRSEW RKVVRPSLAG KRLGIVGLGA VGLAIARRAA AFDIVIGYHN RKPRSDCDYT
WHATAQALAA ASDFLVIATP GGSGTQHLID ARVLEALGPD GFLVNIARAS VVDTQALVSA
LQNEQIAGAA LDVFDDEPTV PDVLKTLGNV VLTPHVAGLS PEASRDSVQR VNDNLLAFFA
GQPVLTPVTE
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