Gene Psyr_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3240 
Symbol 
ID3368767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3879008 
End bp3879730 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID637653591 
Producthypothetical protein 
Protein accessionYP_236310 
Protein GI66046469 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0678648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATAG CAGACAACAC ACGCAACGGG ATACGCATCG GTCTGGTCGG GGACTTCAGT 
GCGGATGTCC CTGCGCATCA GGCCATTCCA TTGGCCTTGC ACAGGGCGGC GGAGGTCGCG
CAGGTAGCGG TTGATATCGA ATGGCTGCCG ACCCCGCAGA TCGGCAGCGG TGCGCACCTC
GCGGAGTTCG ACGGCCTGTG GTGCGTCCCG GCCAGTCCGT ATCGGGACAT GCAGGGCGCG
CTGACCGCCA TCCGTTTCGC TCGCGAGCAT CGGGTGCCGT TTCTGGGGAC GTGCGGGGGC
TTTCAGCACG CGTTGCTCGA GTACGCCCGC CACCAACTGG GCTGGACGGA CGCCGAGCAT
GGCGAAACTG CGCCGGACGC GGCAAACGTG ATTATCGAGC CGCTCAGTTG CTCGCTGGTC
GAGTCGGTGG CAGCGATCCA GTTGCAACCC GACACGCTGA TTGCCCAGGC CTATGGCAGA
CTCGATATCG ACGAGCGCTA CCACTGCCGC TACGGCCTGC GCCGCGAGCT GGAGTCGGTG
CTGTTCGGCG AGCACCTGAA GGTCAGCGGG CGCGGTCCCG AGGGCGAAGT GCGCTGTATG
GAGTTGCAGG GACACCCGTT CTACGTCGCC ACACTGTTCC AGCCGGAGCG CGCTGCGTTG
CTGGGCCAGA CGCCACCTGT GGTGGCCGCG TTTGTCCGCG CCTGCCTGAG CAACTTATCG
TGA
 
Protein sequence
MGIADNTRNG IRIGLVGDFS ADVPAHQAIP LALHRAAEVA QVAVDIEWLP TPQIGSGAHL 
AEFDGLWCVP ASPYRDMQGA LTAIRFAREH RVPFLGTCGG FQHALLEYAR HQLGWTDAEH
GETAPDAANV IIEPLSCSLV ESVAAIQLQP DTLIAQAYGR LDIDERYHCR YGLRRELESV
LFGEHLKVSG RGPEGEVRCM ELQGHPFYVA TLFQPERAAL LGQTPPVVAA FVRACLSNLS