Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3234 |
Symbol | |
ID | 3368761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3873504 |
End bp | 3874112 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653585 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_236304 |
Protein GI | 66046463 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCTCT CTTTCGATTT GCTTCTGGCA TTCACACTCT TCGCGTTCGT CACCTCCATT ACTCCCGGCC CCAACAACAT GATGCTGCTG GCCTCGGGCG TGAATTTCGG TTTCAGTCGC ACCCTGCCGC ACATGCTGGG TATCAGTGTC GGTTTTTTCG TTCTGGTGCT GGCCGTCGGC TTCGGTCTGG GCAGTGTGTT CAAGGCCTGG CCGGTTCTCT ATACGATCCT GCGCTACGTG GGCGCTGCCT ATCTGCTGTA CCTGGCCTGG AAAATCGCCA CCTCGGGGCC GGCCTCCGAT AGCCTCGACA GCGAGGGCAA GCCGCTGAGT TTCATGAGCG CCGCGCTCTT TCAATGGGTC AATCCCAAGG CCTGGATCAT GGCGATCGGC GCGATCAGCA CGTACACCCC CATGCAGGGC TACTTCTACA ACGTGGTGGT GATTTCGGCA GTGTTTGCGC TGATCAACCT GCCCAGCGTG GGCGTCTGGG CAGGCTTTGG CAGTTTGCTG CGCAATGTGC TGCGCGATCC GCTCGGGTTA CGTATTTTCA ACGGCGTCAT GGCAGCGCTG TTGGTGGCCT CGCTGTATCC GTTGTTTATC GAACATTGA
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Protein sequence | MVLSFDLLLA FTLFAFVTSI TPGPNNMMLL ASGVNFGFSR TLPHMLGISV GFFVLVLAVG FGLGSVFKAW PVLYTILRYV GAAYLLYLAW KIATSGPASD SLDSEGKPLS FMSAALFQWV NPKAWIMAIG AISTYTPMQG YFYNVVVISA VFALINLPSV GVWAGFGSLL RNVLRDPLGL RIFNGVMAAL LVASLYPLFI EH
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