| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3230 |
|---|
| Symbol | |
|---|
| ID | 3368757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3868831 |
|---|
| End bp | 3870060 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637653581 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_236300 |
|---|
| Protein GI | 66046459 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.577335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.36301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG CTATCGTCCA CGACTGGCTG GTGAGTTACG CCGGCGCCGA GCGCGTGCTC
GCGTCACTGA TCAACGTCTG GCCCGCTGCG GACCTGTTTG CGGTCATCGA CTTCCTCAGC
GATCAGGACC GCGCGCACCT GCATGGCAAG GTCGCCAGAA CGACGTTCAT CCAGAAGCTG
CCCGGCGCGC GCAAACACTA TTCGCGCTAC CTGCCGCTGA TGCCGCTGGC CATCGAGCAA
CTGGATCTGT CCGGCTATGA CCTGATCATC AGCAGCAGCC ATGCGGTGGC CAAGGGCGTG
CTGTGCGGCC CGGACCAACT GCACATCAGC TATGTGCACT CGCCGATCCG CTATGCCTGG
GACTTGCAGC ACCAGTACCT CCAGGAATCA GGGCTGAACA AGGGAGCCAA GGGCGGTCTG
GCACGCCTGA TCCTGCATTA CATGCGCCTG TGGGATCAGC GCACATCGAC CGGCGTGGAC
GCCTTCATTG CCAACTCCGG GTTTATCGGC GCGCGCATCA CCAAGGCCTA TCGTCGCGAC
TCCACCGTCA TCTACCCGCC GGTAGACACG CTCGGCTTCA CCGCCCAGGG CGCGCGCGGG
GACTTCTATC TCTGTGCCTC GCGAATGGTG CCTTACAAAC GCATGCCGAT GATCGTCGAA
GCCTTTGCCG CCATGCCTGA CAAACGCCTG ATCATGATCG GCGACGGGCC GGACCTGGCC
AAGGCGCAGG CCATTGCCAG CCAGGTGAGC AACGTGACGC TGCTGGGTTT TCAGCCAGGC
AGCGTGCTGC TCGAGCATAT GCGCAGCGCC AGGGCGTTTG TCTTCGCCGC CGAGGAGGAT
TTCGGCATCA GCCCGGTCGA GGCCCAGGCT TGCGGTACGC CGGTCATCGC CTTCGCCAAG
GGCGGCGTCA TGGAGACCGT GCGCGGCCTG GATCACCCGC AGCCGACCGG CGTGTTCTAC
CGAGAGCAAA CGGTAGCGTC ACTGATCGCC GCCATCGGCG AATTCGAAGC GGCGCAATCA
CGCATCTCTC CCGAGGCCTG CCGGGCCAAT GCCGAGCGGT TTTCGGTCGC GCGTTTCGAG
CAGGAAATCA AAGCCTTCGT CGAAGACCGT CTGGCCCTCT CACACGGGGT TCATCTGGCG
CGCCCGCCTC AGTCGCAACG GGTCGCCCAG GCATCACCCG GCCTCGGCAG CGAGCTGCCG
AACCGTGTCG TCCCCCTGAA AATCGTCTGA
|
|---|
| Protein sequence | MRIAIVHDWL VSYAGAERVL ASLINVWPAA DLFAVIDFLS DQDRAHLHGK VARTTFIQKL
PGARKHYSRY LPLMPLAIEQ LDLSGYDLII SSSHAVAKGV LCGPDQLHIS YVHSPIRYAW
DLQHQYLQES GLNKGAKGGL ARLILHYMRL WDQRTSTGVD AFIANSGFIG ARITKAYRRD
STVIYPPVDT LGFTAQGARG DFYLCASRMV PYKRMPMIVE AFAAMPDKRL IMIGDGPDLA
KAQAIASQVS NVTLLGFQPG SVLLEHMRSA RAFVFAAEED FGISPVEAQA CGTPVIAFAK
GGVMETVRGL DHPQPTGVFY REQTVASLIA AIGEFEAAQS RISPEACRAN AERFSVARFE
QEIKAFVEDR LALSHGVHLA RPPQSQRVAQ ASPGLGSELP NRVVPLKIV
|
|---|
| |