Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3229 |
Symbol | |
ID | 3368756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3867642 |
End bp | 3868757 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653580 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_236299 |
Protein GI | 66046458 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.453901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.382919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTCA TCAATGCACG GTTTCTTACC CAGGACATCA GTGGTGTACA GCGCTACGCA GAGCAGATGT GCCGAGCGCT GAAGCGACTG CGCGACGATC TGGTATTCGT TGCCCCGCAT AACATCAGAC TGCATGACTG CGCCAGCGCA CTGGAGGCGC ACTGCATCGG GCGCTCCATC GGGCATGCGT GGGAGCAGAT CGACCTGCCG CTGTACCTGA AACGTCGGGG CAGTCCGCTG CTGATCTCGA TCAGCAACAC CGGGCCCATG CTGTATGGCA ACCAGATTGC GACTCACCAC GACATCAACT ATGTGCGCTA CCCGCAAAGT TACACCCGGC TGTTCCGGCT GGCCTATCGG ACCATCACCC CGATCCTGCT GTCGCGCGCC AGAACGCTGA TCACCGGCAG CCACTTCTCG CGCAAAGAAA TATCCTCGTT CTATGGCTAC GCAGAAGACA AGGTGCTCGT CGTCCCTGCT GCGGTCAGCG ACGATTTCAT ACCGGGGCCG ACCGCTGTGA ATCGTCCGAA ATACCTGTTG GCCGTGTCTT CGCCGGCCGT GCACAAGAAT TTCAGACGGA TGATTCAGGC CTTTCTCAGC CTGCGTGGCC ACACGGATCT GCAGCTGCAC ATTGTCGGCG CAGCCAGCGC GCTGTTCGCC GACCCGAACC TGCAACACCT CGCCTGCCGT GACCCGCGTA TCCGTTTTCT GGGACGCCTC AGTGACGCCG AGCTGATCGC GCAATACCAG GGCGCGACCG CGTTCGTGTT CCCGTCGCTT TACGAGGGCT TCGGCATCCC GCCGCTCGAA GCCCAGGCCT GCGGCTGTCC GGTGCTGGCG GCCAATGCCG CGTCGATCCC GGAAGTTCTG CAGGCCAGTG CGCTGTATTT CGACCCGCTG GACGTCAGTC ACATGGCCGC AGCCATGCAG CGCATTCTGC TGGATGCGCC CTTGCGCAAC GCGCTGCGTG TCCAGGGCCT GCAAAACGTG CAGCGTTTTT CCTGGGAGCT TTCCGCGCAA CGCCTTTCCC AGCGCATCGA TACGTTGCTG GCGTCTGACC CCGTGCAGCA AAGCAAGCTG CACGTCGCTG CCGACTCGCC CAGCGGCAAA CCCTGA
|
Protein sequence | MIFINARFLT QDISGVQRYA EQMCRALKRL RDDLVFVAPH NIRLHDCASA LEAHCIGRSI GHAWEQIDLP LYLKRRGSPL LISISNTGPM LYGNQIATHH DINYVRYPQS YTRLFRLAYR TITPILLSRA RTLITGSHFS RKEISSFYGY AEDKVLVVPA AVSDDFIPGP TAVNRPKYLL AVSSPAVHKN FRRMIQAFLS LRGHTDLQLH IVGAASALFA DPNLQHLACR DPRIRFLGRL SDAELIAQYQ GATAFVFPSL YEGFGIPPLE AQACGCPVLA ANAASIPEVL QASALYFDPL DVSHMAAAMQ RILLDAPLRN ALRVQGLQNV QRFSWELSAQ RLSQRIDTLL ASDPVQQSKL HVAADSPSGK P
|
| |