Gene Psyr_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3224 
Symbol 
ID3368751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3862023 
End bp3862475 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content62% 
IMG OID637653575 
Productlow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_236294 
Protein GI66046453 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.067627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.207784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGTA GTGTGCTGGT GGTGTGCGTG GGCAACGTCT GCCGCAGTCC GATGGCCGTC 
GCGATGCTGC ATCAACGCCT GAAAGCCACG CAGGTACGTA TTCAGTCGGC AGGCATCGCT
GCGTTATCGG GTTCGTCGAT CGACCCGACA GCACATGCGG TTCTGCAGTC GCACCGGGTT
CAACCTCAGC GGCACGCCGC TCGCCAGATG AGTCGCGAGC TGCTGCGCCA GGCCGACCTG
ATCCTGCTGA TGGAGCAGGC GCATTTTTCC GACGTCCTCG ACCTTGCCCC CGAAGTGCGC
GGCAAAGCCT TTCTGATCGG TAAATGGCAG GACCCGCTCG ACATCACCGA CCCTTACCGG
CGCCCCGCGT CAGCCTTCGA GCAGACCTAC GCGCAGCTCT CACGCTGCAT TGACGACTGG
CTTCCCCATT TTCAGTCAGG AGCAACAGGA TAA
 
Protein sequence
MFSSVLVVCV GNVCRSPMAV AMLHQRLKAT QVRIQSAGIA ALSGSSIDPT AHAVLQSHRV 
QPQRHAARQM SRELLRQADL ILLMEQAHFS DVLDLAPEVR GKAFLIGKWQ DPLDITDPYR
RPASAFEQTY AQLSRCIDDW LPHFQSGATG