| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3223 |
|---|
| Symbol | |
|---|
| ID | 3368750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3861098 |
|---|
| End bp | 3862033 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653574 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_236293 |
|---|
| Protein GI | 66046452 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0595343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.234562 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACA CTGTAAAAAA TACCGACGAA ACCTGTCTGG CGCCGCCGCT GCTGAGCGTC
ATATGCCCTG CCTACAACCA GGAGGCCTTC ATCGCTCAGG CGCTGGACGG GCTTTTGGCA
CAGCAGACCG ATTTCAGGTA CGAAATCCTG ATCAACGACG ACGCCTCCAC AGACGCCACC
GCGCGCATCA TTGCGCACTA CGCCGAGCGG CATCCGACGA TCATTCGGAC CTTCTATCAG
CAGGTCAATC AGTACAGTCA GGGCAGAGCG TGCGTCCCGG GCCTGTTTGG CGATGCACGC
GGTCGCTACA TCGCCTACTG CGAAGCCGAC GACTATTGGA CCGATCCGCG AAAGCTGCAG
CAGCAAGTGG ACTTTCTCGA AGCTCATCCG GATTACGTCA TCACCTATCA CGACGCGTTC
GTCTTCGATG AGCACGGCCA GTATGGCGTG CAGTTGCAAG GCCATCTGCG CGCCGATGCC
TCGGCACTGG AGTTGCAACA GGCAAGACGC CTGTCGACCC TGACCGTCTG CTTTCGCAAT
GTGTTCAGCC AGATGCCACC CGAATTGAGC CTGTGCAGCG CGCCGTTGAA CGATATGTGC
TGGTGGTCGT TGCTGGGGGC CTACGGCAAG GGCAAGTTCA TGGCCGGGAT CAAGCCGGCC
GCTTATCGGA TGCACCCGGG CGGGGTGTTC TCGATGCGCA GTGACAAACG CAAGTTGCAC
ATGAACCTGC AGACCTGCTC AAGCCTGGCC AACTATTACA ACCGCCTCGG CAATCAGCCG
CTGTACCAGT ATTTCCTGAT GCAGACGGTG TGCCTGTCGC TGGCGGCGCT CGCCCCACGC
CACAAGTTGC AGACGCTGTG CAAAGTGGCA GGCAACGTGA TCGGCAACCT GGCCAGGCGC
CTGTTGCCAG CCACCGGCAA AGCTCATGTT CAGTAG
|
|---|
| Protein sequence | MDDTVKNTDE TCLAPPLLSV ICPAYNQEAF IAQALDGLLA QQTDFRYEIL INDDASTDAT
ARIIAHYAER HPTIIRTFYQ QVNQYSQGRA CVPGLFGDAR GRYIAYCEAD DYWTDPRKLQ
QQVDFLEAHP DYVITYHDAF VFDEHGQYGV QLQGHLRADA SALELQQARR LSTLTVCFRN
VFSQMPPELS LCSAPLNDMC WWSLLGAYGK GKFMAGIKPA AYRMHPGGVF SMRSDKRKLH
MNLQTCSSLA NYYNRLGNQP LYQYFLMQTV CLSLAALAPR HKLQTLCKVA GNVIGNLARR
LLPATGKAHV Q
|
|---|
| |