Gene Psyr_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3205 
Symbol 
ID3368727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3836944 
End bp3837453 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content61% 
IMG OID637653551 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_236275 
Protein GI66046434 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0415591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.16673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG CTTTCTACTT CGCATCCGGT ATCGCTGTTG TGTCCACCCT GCGGGTGATC 
ACCAACACGA ACCCGGTGCA CGCCCTGCTC TACCTGATCA TCTCGCTGAT CGCCGTAGCA
ATGACGTTCT TCAGCCTCGG CGCGCCGTTC GCCGGTGTGC TGGAAGTCAT TGCCTACGCG
GGCGCGATCA TGGTCCTGTT CGTGTTTGTG GTGATGATGC TCAACCTCGG CCCGGCCTCG
GTTCAGCAGG AACGTGCCTG GCTCAAACCC GGCATCTGGA TAGGCCCGGT CATTCTCGGC
GCGCTGTTGC TGGCCGAGTT GCTGTATGTG CTGTTCGCCA ACCCGACCGG CGCTGGTGTC
GGTCACACCA CGGTCGACGC CAAGGCAGTC GGCATCAGCC TGTTCGGGCC CTATCTGCTG
GTGGTGGAAC TCGCCTCGAT GTTGTTGCTT GCAGCAGCCA TCACGGCCTT CCATCTGGGC
CGCAACGAGG CCAAGGAGCC AAGCCAATGA
 
Protein sequence
MEFAFYFASG IAVVSTLRVI TNTNPVHALL YLIISLIAVA MTFFSLGAPF AGVLEVIAYA 
GAIMVLFVFV VMMLNLGPAS VQQERAWLKP GIWIGPVILG ALLLAELLYV LFANPTGAGV
GHTTVDAKAV GISLFGPYLL VVELASMLLL AAAITAFHLG RNEAKEPSQ