Gene Psyr_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3189 
Symbol 
ID3368711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3819057 
End bp3819503 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID637653535 
ProductNUDIX hydrolase 
Protein accessionYP_236259 
Protein GI66046418 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.283215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.137155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGC AAGCCCACGT TACCGTCGCC ACCATCGTCG AAGATCAAGG CCGCTTTCTT 
TTTGTCGAAG AAATCAAAGG CGGACGCGCC GTACTCAACC AACCCGCCGG GCACCTCGAC
CCGAACGAAA GCCTGCAACG CGCCGCCGTG CGTGAAACCC TGGAAGAAAC CGGCTGGGAC
GTCGAATTGA GCAGCGTGGT GGGCATCTAC CTGTACACCG CGCCGAGCAA TGGCGTGACC
TACCAGCGAA TCTGCTTTGC CGCCAAGGCC CTGCGCCACC ATCCGGAATA TCAACTCGAT
GAAGGCATCG TCGGCGCAGT CTGGCTGACT CGCGATGAAC TGGTGGCCCA GCAGGAGCGC
TGGCGCAGCG AGTTGGTATT GCGTTGCCTG GACGACTACC TCGATGGCGA ACGTTTCAGT
CTCGACCTGC TGCGCGACAA GGCGTGA
 
Protein sequence
MTWQAHVTVA TIVEDQGRFL FVEEIKGGRA VLNQPAGHLD PNESLQRAAV RETLEETGWD 
VELSSVVGIY LYTAPSNGVT YQRICFAAKA LRHHPEYQLD EGIVGAVWLT RDELVAQQER
WRSELVLRCL DDYLDGERFS LDLLRDKA