| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3186 |
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| Symbol | |
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| ID | 3368708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3814551 |
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| End bp | 3816773 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653532 |
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| Product | isocitrate dehydrogenase NADP-dependent, monomeric type |
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| Protein accession | YP_236256 |
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| Protein GI | 66046415 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.467142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.225365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC GCTCGAAGAT CATCTACACC TTCACCGACG AAGCTCCGGC CCTCGCCACC
TACTCCCTGC TGCCCATTAT CGAAGCGTTC ACAGCGACCT CCGATATCGA CGTGGAAACA
CGCGACATTT CTCTGGCGGG CCGTGTTCTT TCCAGCTTCC CGGAATTGCT TGCCGACAAA
AAAGTGCCGG ATCATCTCGC CGAGCTGGGC AAACTGGCTA CCACGCCAGA GGCCAATATC
ATCAAGCTGC CTAACATAAG CGCCTCGGTC CCGCAATTGA AGGCGACCAT CAAGGAGCTT
CAGAATCAGG GCTACAACAT TCCTGACTAC CCTGAAAACC CTGCCACTGA CGCGGAAAAA
GAAACCCGCG CACGCTACGA CAAGACCAAG GGCAGCGCCG TGAACCCGGT TCTGCGCGAA
GGCAATTCCG ATCGCCGCGC CCCGCTGTCG GTCAAGAATT ATGCGCGCAA GCACCCGCAC
AAGATGGGCG CCTGGTCGGC TGACTCCAAG GCTCACGTTG CACACATGAG CAACGGCGAC
TTCTACGGCA GCGAAAAAGC CGCCGAGATC GCGGCCGACA ATACCGTCAA GATCGAACTC
GTCGCTCAGG ACGGCACCAC CACCGTCCTG AAGGAAAAAA CCGCCGTCAA GGCTGGCGAA
GTCGTCGACT GCTCGGTCAT GAGCGCCAAG GCCCTGCGCA GCTTCATTGC TGCCGAAATC
GAAGACGCCC GCAAGCAGGG CGTGCTGTTT TCGGTGCACT TGAAAGCCAC CATGATGAAG
ATCTCCGACC CGATCATGTT TGGCCAGATC GTCGACGAGT TCTATAAGGA TGCGCTGACC
AAGCACGCTG ATACGCTCAA GCAGATCGGC TTCAGCCTGA ACAACGGCAT CGGCGACCTA
TACGAGCGCA TCACTGCCCT GCCCGCTGAC AAGCAGGCAG AGATCAAGGC TGACATCGAA
GCGGTCTACG CCGTTCGCCC ACAGCTGGCG ATGGTCAATT CCGACAAGGG CATCACCAAC
CTGCACGTGC CGAGCGACGT CATCGTCGAC GCCTCGATGC CGGCAATGAT CCGTGACTCC
GGCAAGATGT GGGGCACAGA CGGTCAGTTG CACGATGCCA AGGCCGTCAT TCCGGATCGC
TGCTACGCCA CCATCTATCA AGCGGTCATC GAAGACTGCA AGAAAAATGG CGCATTCGAC
CCGACCACCA TGGGCAGCGT ACCGAACGTC GGCCTGATGG CTCAGAAGGC CGAAGAGTAT
GGCTCCCACG ACAAGACGTT CCACATTCAG ACCAACGGCG TGGTTCGCGT AACCGACATC
CAGGGCAACC TGCTGATGGA ACAGAACGTC GAAGCCGGCG ATATCTGGCG CATGTGCCAG
GCCAAGGACG CACCGATCCA GGACTGGGTG AAACTGGCCG TCAACCGTGC CCGCGCCAGC
AACACCCCGG CTATCTTCTG GCTGGACTCA TCCCGCGCCC ACGACAGCGT GATGATCGAA
AAAGTGCGCA AGTACCTGGG CGACCACGAC ACCTCGGGCC TGGATATCCA GATCCTGTCA
CCTGTCGACG CGATGAAGCT GACCCTGGAA CGCACGCGCG CAGGCAAGGA CACCATTTCG
GTGACCGGCA ACGTTCTGCG CGACTACCTG ACTGACCTGT TCCCGATCAT GGAACTGGGC
ACCAGCGCGA AGATGCTGTC GATCGTTCCG CTGATGAACG GCGGCGGTCT GTTCGAAACA
GGCGCCGGTG GGTCGGCTCC GAAGCACGTG CAGCAGTTCG TCGAGGAAAA CTTCCTGCGC
TGGGATTCGC TGGGCGAATT CCTGGCCCTG GCGGCGTCCC TCGAGCATCT GGGCCATGCC
TACAACAATC CGAAAGCGCT GGTTCTGTCC AAGACCCTCG ATCAGGCCAC TGGCGAGTTC
CTGGACCGTA ACAAGTCGCC TTCGCGCAAG GTCGGCGGTA TCGATAACCG CGGCAGCCAC
TTCTACCTGA CCCTGTTCTG GGCCCAGGCA CTGGCTGCTC AGAACGACGA CGCAGACCTC
AAGGCGCAGT TCGCGCCGCT GGCCAAGACC CTGACCGACA ACGAAGAAAA AATCGTTGCC
GAGCTGAACG CCGTTCAGGG CAAGCCGGTG GACATTGGCG GCTACTACTT CCCTAACCCG
GAAGTCACCA GCAAGGCCAT GCGCCCGAGC GCCACGCTCA ACGCGGCCAT CGCCGCGCTG
TAA
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| Protein sequence | MSNRSKIIYT FTDEAPALAT YSLLPIIEAF TATSDIDVET RDISLAGRVL SSFPELLADK
KVPDHLAELG KLATTPEANI IKLPNISASV PQLKATIKEL QNQGYNIPDY PENPATDAEK
ETRARYDKTK GSAVNPVLRE GNSDRRAPLS VKNYARKHPH KMGAWSADSK AHVAHMSNGD
FYGSEKAAEI AADNTVKIEL VAQDGTTTVL KEKTAVKAGE VVDCSVMSAK ALRSFIAAEI
EDARKQGVLF SVHLKATMMK ISDPIMFGQI VDEFYKDALT KHADTLKQIG FSLNNGIGDL
YERITALPAD KQAEIKADIE AVYAVRPQLA MVNSDKGITN LHVPSDVIVD ASMPAMIRDS
GKMWGTDGQL HDAKAVIPDR CYATIYQAVI EDCKKNGAFD PTTMGSVPNV GLMAQKAEEY
GSHDKTFHIQ TNGVVRVTDI QGNLLMEQNV EAGDIWRMCQ AKDAPIQDWV KLAVNRARAS
NTPAIFWLDS SRAHDSVMIE KVRKYLGDHD TSGLDIQILS PVDAMKLTLE RTRAGKDTIS
VTGNVLRDYL TDLFPIMELG TSAKMLSIVP LMNGGGLFET GAGGSAPKHV QQFVEENFLR
WDSLGEFLAL AASLEHLGHA YNNPKALVLS KTLDQATGEF LDRNKSPSRK VGGIDNRGSH
FYLTLFWAQA LAAQNDDADL KAQFAPLAKT LTDNEEKIVA ELNAVQGKPV DIGGYYFPNP
EVTSKAMRPS ATLNAAIAAL
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