| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3185 |
|---|
| Symbol | |
|---|
| ID | 3368707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3813654 |
|---|
| End bp | 3813932 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637653531 |
|---|
| Product | cold-shock protein, DNA-binding |
|---|
| Protein accession | YP_236255 |
|---|
| Protein GI | 66046414 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.937654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.149852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAG GAAAAGTCAA GTGGTTCAAC AATGCAAAAG GGTTTGGGTT CATAAACGCT
GAAGGCAAGA GTGACGAGGA TCTGTTCGTT CATTTCTCGG CCATCGAAAT GGACGGTTAC
AAAACTCTCA AGGCTGGCCA GAAAGTCAGA TTTGAAGTCG CCCACGGCCC AAAAGGGCTT
CAGGCGATAA AAATCAACAG CTCGGAAGAA AAAAAGCAGG ATCCGGCAAA AGATACCCAG
CCGCTGCTTC AGCAGGACCA CGCTCACGCG GACGCCTGA
|
|---|
| Protein sequence | MIEGKVKWFN NAKGFGFINA EGKSDEDLFV HFSAIEMDGY KTLKAGQKVR FEVAHGPKGL
QAIKINSSEE KKQDPAKDTQ PLLQQDHAHA DA
|
|---|
| |