Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3180 |
Symbol | aat |
ID | 3368702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3808879 |
End bp | 3809568 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653526 |
Product | leucyl/phenylalanyl-tRNA--protein transferase |
Protein accession | YP_236250 |
Protein GI | 66046409 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.154067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0494338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACCT GGTTGAACCG CAACAGCCTC GATTTTCCCC CATTGGAAAA AGCCCTCCGT GAACCCAACG GTTTGCTCGC CGCAGGCGGA GACTTGTCAG CCGATCGCCT GATCAGCGCC TATCGACACG GCTGCTTTCC CTGGTTTCAG GACGGGCAGC CGATTCTCTG GTGGTCTCCC GATCCGCGCA CGGTGCTGTT TCCCGAAGAA CTTCATATTT CGCGCAGCCT GGCCAAGGTT CTGCGCCAGT CGCGCTATCG GGTGACCTTC GATCAGGATT TCGCCAGCGT GATCAAGGCC TGCGCCGCCC CTCGCAGTTA TGCCAACGAA ACCTGGATAA CCGGCTCGAT GCAGGCGGCC TATGTCGAAC TGCACCGCCG CGGTCACGCA CATAGCGTCG AGGTCTGGGA TCAGGATGAG CTGGTCGGCG GGCTGTACGG CCTGGCAATG GGCCAGCTGT TTTTCGGCGA GTCGATGTTC AGCCGGGCAG ACAATGCCTC GAAAGTCGGT TTTGCCACCC TGGTGGAACA TTTGACTGCC TGGGGATTTG TCTTGATCGA CTGCCAGATG CCCACGCAAC ATTTGCATAG CTTCGGCGCG CGCTCCATTC CCCGGCAGAC CTTCGCCGAT TACCTGTCCC GCCATCTGGA TCAGCCGACC GACGCCGACT GGTCAGCTAG GCGAGTTTGA
|
Protein sequence | MLTWLNRNSL DFPPLEKALR EPNGLLAAGG DLSADRLISA YRHGCFPWFQ DGQPILWWSP DPRTVLFPEE LHISRSLAKV LRQSRYRVTF DQDFASVIKA CAAPRSYANE TWITGSMQAA YVELHRRGHA HSVEVWDQDE LVGGLYGLAM GQLFFGESMF SRADNASKVG FATLVEHLTA WGFVLIDCQM PTQHLHSFGA RSIPRQTFAD YLSRHLDQPT DADWSARRV
|
| |