Gene Psyr_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3180 
Symbolaat 
ID3368702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3808879 
End bp3809568 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content60% 
IMG OID637653526 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_236250 
Protein GI66046409 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.154067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0494338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCT GGTTGAACCG CAACAGCCTC GATTTTCCCC CATTGGAAAA AGCCCTCCGT 
GAACCCAACG GTTTGCTCGC CGCAGGCGGA GACTTGTCAG CCGATCGCCT GATCAGCGCC
TATCGACACG GCTGCTTTCC CTGGTTTCAG GACGGGCAGC CGATTCTCTG GTGGTCTCCC
GATCCGCGCA CGGTGCTGTT TCCCGAAGAA CTTCATATTT CGCGCAGCCT GGCCAAGGTT
CTGCGCCAGT CGCGCTATCG GGTGACCTTC GATCAGGATT TCGCCAGCGT GATCAAGGCC
TGCGCCGCCC CTCGCAGTTA TGCCAACGAA ACCTGGATAA CCGGCTCGAT GCAGGCGGCC
TATGTCGAAC TGCACCGCCG CGGTCACGCA CATAGCGTCG AGGTCTGGGA TCAGGATGAG
CTGGTCGGCG GGCTGTACGG CCTGGCAATG GGCCAGCTGT TTTTCGGCGA GTCGATGTTC
AGCCGGGCAG ACAATGCCTC GAAAGTCGGT TTTGCCACCC TGGTGGAACA TTTGACTGCC
TGGGGATTTG TCTTGATCGA CTGCCAGATG CCCACGCAAC ATTTGCATAG CTTCGGCGCG
CGCTCCATTC CCCGGCAGAC CTTCGCCGAT TACCTGTCCC GCCATCTGGA TCAGCCGACC
GACGCCGACT GGTCAGCTAG GCGAGTTTGA
 
Protein sequence
MLTWLNRNSL DFPPLEKALR EPNGLLAAGG DLSADRLISA YRHGCFPWFQ DGQPILWWSP 
DPRTVLFPEE LHISRSLAKV LRQSRYRVTF DQDFASVIKA CAAPRSYANE TWITGSMQAA
YVELHRRGHA HSVEVWDQDE LVGGLYGLAM GQLFFGESMF SRADNASKVG FATLVEHLTA
WGFVLIDCQM PTQHLHSFGA RSIPRQTFAD YLSRHLDQPT DADWSARRV