| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3177 |
|---|
| Symbol | |
|---|
| ID | 3368699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3803963 |
|---|
| End bp | 3805285 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637653523 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_236247 |
|---|
| Protein GI | 66046406 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0569954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGT TCAGCCGCGA ACCGATAGCC CAGCCTCTGG CTGCACGTTT GCGTGCTACC
AACCTGGATG AATATGTCGG TCAGGAACAT GTACTTGCCC ACGGCAAGCC TCTGCGTGAG
GCGCTGGAGC AAGGCGCACT GCACTCGATG ATTTTCTGGG GGCCGCCCGG CGTGGGCAAG
ACCACCCTGG CGAAGCTGCT GGCCAAGGTG TCGGACGCGC ACTTCGAGAC GGTTTCGGCG
GTGCTCGCCG GGGTCAAGGA AATCCGTCAG GCAGTGGAAG TGGCCAGGCA GCAGGCCGGA
CAGTACGGCA AGCGCACCAT CCTGTTCGTT GACGAAGTGC ACCGCTTCAA CAAGTCACAG
CAGGACGCCT TCCTGCCTTA CGTCGAGGAC GGTACGCTGA TCTTTATCGG CGCGACCACC
GAAAACCCCT CGTTCGAACT CAACAACGCC TTGTTGTCCC GGGCGCGTGT CTACGTGCTC
AAAAGCCTGG ACGAAGCGGC GCTGCGCAAG CTGGTCAATC GTGCCCTGAC CGAAGAGCGC
GGGCTGGGCA AGCGGCAACT GACCCTGAGC GATGAGGGGT TTGCGATTCT GATGTCTGCC
GCCGATGGCG ACGGTCGGCG CATGCTCAAC CTGCTGGAGA ACGCTTCGGA TCTGGCCGAA
GACGGCAGCG AAATCGACGT CGGGCTGCTG CAAAGCCTGT TGGGTGACAG TCGACGCCGC
TTCGACAAGG GCGGCGAGGC GTTCTATGAC CAGATATCGG CCTTGCACAA GTCGATTCGC
GGTTCAAATC CCGATGCGGC GCTGTACTGG TTTGCGCGGA TGATCGACGG CGGCTGTGAT
CCACTGTATC TGGCGCGCCG CGTGGTGCGC ATGGCCAGTG AAGATATCGG CAATGCCGAT
CCTCGTGCGC TGCCCTTGTG CATGTCCGCC TGGGATGTAC AGGAACGCCT TGGCAGCCCC
GAGGGCGAGC TGGCGGTCGC ACAGGCCATT GTCTATCTCG CCTGTGCGCC GAAAAGCAAC
GCGGTCTACA TGGCGTTCAA GGCGGCCATG CGTGAAGCGG GTGAGCACGG TTCGCTGGAG
GTTCCGCTGC ACTTGCGCAA TGCGCCTACC AAGCTGATGA AGCAGCTCGG TTATGGCGAA
GAATATCGCT ATGCCCATGA TGAGCCTGAT GCTTACGCAG CTGGCGAAGA CTACTTTCCA
GATGAGCTGG AGCCACGGCA GTATTACCAG CCTGTGCCTC GCGGTCTGGA GCTCAAGATC
GGTGAAAAGC TCAGGCATCT GAACGCATTG GACGATGCCA GCCCTCGCAA GCGGAGAAAG
TGA
|
|---|
| Protein sequence | MDLFSREPIA QPLAARLRAT NLDEYVGQEH VLAHGKPLRE ALEQGALHSM IFWGPPGVGK
TTLAKLLAKV SDAHFETVSA VLAGVKEIRQ AVEVARQQAG QYGKRTILFV DEVHRFNKSQ
QDAFLPYVED GTLIFIGATT ENPSFELNNA LLSRARVYVL KSLDEAALRK LVNRALTEER
GLGKRQLTLS DEGFAILMSA ADGDGRRMLN LLENASDLAE DGSEIDVGLL QSLLGDSRRR
FDKGGEAFYD QISALHKSIR GSNPDAALYW FARMIDGGCD PLYLARRVVR MASEDIGNAD
PRALPLCMSA WDVQERLGSP EGELAVAQAI VYLACAPKSN AVYMAFKAAM REAGEHGSLE
VPLHLRNAPT KLMKQLGYGE EYRYAHDEPD AYAAGEDYFP DELEPRQYYQ PVPRGLELKI
GEKLRHLNAL DDASPRKRRK
|
|---|
| |