Gene Psyr_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3154 
Symbol 
ID3368675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3780456 
End bp3781100 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID637653499 
Productregulatory protein, TetR 
Protein accessionYP_236224 
Protein GI66046383 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0193225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGC ATGACCCCAC GGAAACGGGC ACGGCAGTCA CCCGACAGCG ACGCGCGCCA 
AAGGGCGAAA AGCGCCGCGA AGAACTGCTC GATGCAGCCC TGCAAGTGTT TTCCCTTGAA
GGCTATACCG GCGCTTCGGT GGCCAAGGTG GCAGCCATCG TCGGTATTTC CGTCGCCGGA
TTGCTGCACC ATTTTCCGAG CAAGATCTCG CTGCTGATGG GCGTGCTGGA GCGACGCGAC
GAGGTCAACG GCCGAATTGC TGCCGAAGTC CGCACCGATA ACACCCTGAC CGGTCTGCTC
GGCGGCTTGC GCGCGATCAA CCGCTCCAAC GCTACGGCGC CCGGCGTGGT ACGTGCATTT
TCGATCCTCA ATGCGGAAAG TCTGCTGGAA AACCAGCCTG CCTTTGAATG GTTCCAGACG
CGCTACGAGC GTATTCACGC GCACTTGCTG GGACAGTTTT CGGCTTTGGT GGAGCGCGGG
GAGGTACGTG CGGATGTGGA TCTGGACAAG ATCATCCGGC AGATTCTGGC GATGATGGAT
GGTTTGCAGA TTCAGTGGTT ACGCTTTCCC GATCAGGTGG ATCTGGTCGA GTGTTTCGAT
ACCTACATTG CGCAGGTCGA TGCAGCGGTA AGGGCTCGTC CCTGA
 
Protein sequence
MTRHDPTETG TAVTRQRRAP KGEKRREELL DAALQVFSLE GYTGASVAKV AAIVGISVAG 
LLHHFPSKIS LLMGVLERRD EVNGRIAAEV RTDNTLTGLL GGLRAINRSN ATAPGVVRAF
SILNAESLLE NQPAFEWFQT RYERIHAHLL GQFSALVERG EVRADVDLDK IIRQILAMMD
GLQIQWLRFP DQVDLVECFD TYIAQVDAAV RARP