Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3154 |
Symbol | |
ID | 3368675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3780456 |
End bp | 3781100 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653499 |
Product | regulatory protein, TetR |
Protein accession | YP_236224 |
Protein GI | 66046383 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0193225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.108939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGGC ATGACCCCAC GGAAACGGGC ACGGCAGTCA CCCGACAGCG ACGCGCGCCA AAGGGCGAAA AGCGCCGCGA AGAACTGCTC GATGCAGCCC TGCAAGTGTT TTCCCTTGAA GGCTATACCG GCGCTTCGGT GGCCAAGGTG GCAGCCATCG TCGGTATTTC CGTCGCCGGA TTGCTGCACC ATTTTCCGAG CAAGATCTCG CTGCTGATGG GCGTGCTGGA GCGACGCGAC GAGGTCAACG GCCGAATTGC TGCCGAAGTC CGCACCGATA ACACCCTGAC CGGTCTGCTC GGCGGCTTGC GCGCGATCAA CCGCTCCAAC GCTACGGCGC CCGGCGTGGT ACGTGCATTT TCGATCCTCA ATGCGGAAAG TCTGCTGGAA AACCAGCCTG CCTTTGAATG GTTCCAGACG CGCTACGAGC GTATTCACGC GCACTTGCTG GGACAGTTTT CGGCTTTGGT GGAGCGCGGG GAGGTACGTG CGGATGTGGA TCTGGACAAG ATCATCCGGC AGATTCTGGC GATGATGGAT GGTTTGCAGA TTCAGTGGTT ACGCTTTCCC GATCAGGTGG ATCTGGTCGA GTGTTTCGAT ACCTACATTG CGCAGGTCGA TGCAGCGGTA AGGGCTCGTC CCTGA
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Protein sequence | MTRHDPTETG TAVTRQRRAP KGEKRREELL DAALQVFSLE GYTGASVAKV AAIVGISVAG LLHHFPSKIS LLMGVLERRD EVNGRIAAEV RTDNTLTGLL GGLRAINRSN ATAPGVVRAF SILNAESLLE NQPAFEWFQT RYERIHAHLL GQFSALVERG EVRADVDLDK IIRQILAMMD GLQIQWLRFP DQVDLVECFD TYIAQVDAAV RARP
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