Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3153 |
Symbol | |
ID | 3368674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3777676 |
End bp | 3780417 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653498 |
Product | Beta-glucosidase |
Protein accession | YP_236223 |
Protein GI | 66046382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.139372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.15667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGC GAAAGATGAT GGGCGCGCAC TCGGCGCTGG CCTTGCTGGC ATTGGCAGTA TCCCAGGTGC ACGCCGCTGA CCCTACCGTA CAACAAGGGC GTGAAGATCG CGCCGAAAAA GCCGCACAGA AAACCCTGGC CAAGATGACC ATGGAAGAAA AGCTGGCCTA CATTGGCGGC ACCGGCGGCT GGGACGTCAA GCCACTGACC AATTACGGCG TCCCGCAGAT CCACGGCGCT GACGGCGGTG TGGGCGTGCG CTACACCAGC GAAGGCAACG ATCAGGGTGT TGTCTACCCG TCCGGCCCTA ACCTGGCCGC CACCTTCAAC CCGCGTCGTG CCATCGACCT CGGCCGTGCG CTGGGTTATG ACACTGCCGT CGGCGGCTAC CAGTTCATCA CTGGCCCCGG CGTCAACCTG TACCGCATGC CGTACGGCGG CCGTGCGTTC GAATACCTTT CCGGTGAAGA CCCGTTCCTT GGCGCCAGCC TGGCACCGGG CGTCATCAAC GGTATCCAGT CTCGTGGTGT ATGGGCCAAC GCCAAGCACT ACGCGGCCAA CGACCAGGAA AGCAACCGCT TCAATCTGAA TCAGACAATG CCAGAGCGCG TACTGCGTGA AATGTCGTTG CCTGCGTTCG AATCGTCGTC GAAAAACGGC AATGTGGCGA TGATGATGTG TGCCTTCCAG AAGGTGAACG GTGATTTCGC CTGCGAAAGC GACCACCTGA TCGCCCAGAT CCTGAAGAAG GAATGGGGCT TCAAAGGCTT CGTACAGAGC GACTACAACG CTGTCGTTCA CGGTTTCAAC GCTGCCCGCG CCGGTACCGA TCTGGACATG ATGGGCTACC AGATGAACAG CTCCGTGCTG AAGCCGCATC TGGACGCCGG CGACCTGAGC GCTGCGACCA TCGACGACAA GGTCCGCCGC ATCCTCAAGC AGATCTACCT GTACAAGTTC GACAGCAAGA CGCCGCTGAC CACGCACAAC ATGAACAGCT CGACCAGCAA CAAAGTTGCT CTGAACGCTG CGCGTGAAGG TATCGTACTG CTGAAAAACC AGGACAATCT GCTGCCGCTG GACAAGCAGA AAGTCAAGAA AATCGCCGTT GTCGGCACCC TGGCCAAGTA CTCGCCACCG ACCGGTTTCG GCAGCGCCAA CGTCATGGCC AGCCATTACG TCAGCGAGCT GAGCGGCCTG CAACAGATCG CGCCTAACGC CAAGGTCGAC TTCATCGAAG GCCTGTCGCT GGACCCAAGC ACCAGTGCCT GGACCACCAC CGACGCAACT GGCAACGAAG TCCAGGGCAT GAAGGTCGAG TACTTCAGCA ACACCAACTG GTCTGGTGAT GCAGCTGTCA CGCGTACCGA GAAGCACGTT GACCTGGACT GGGCCAACGA CAAGAACCTG CCGTTCGAAA GCAACACTTC GACGTCCGAT CCGTACGCCA GCAAAGGTTC GACCGCTGGC CAGCTGAATG GCGATACATC GTCGACTTCG ATTCGCTACA CCGGCAAGGT GACTCCGACC CAGAGCGGCG AGCAGGTGTT CAAGGTGCGT GCCGACGGCG CGGTGCGTCT GTGGGTCAAC GGCAAGAAAA TCATCGACAA CGGTGACGGC AAGCCGCTTC CGGGCAACAG CATTCCGCCA ACCATTCCAG AGTTCGCCAA GATCAATCTG GAAGCGGGCC AGTCTTACGA CGTGAAGCTC GAGTACTCGC GTCGTGCCGG CTACCTGTCG ACCATGGGCG GCCTGGTAGG TGTGCAGTTG AGCTCCGCCT CGCTGAACGC TCCTCAGGAC CTGTCCGGTT ATGACGCCGT CGTGGTTGCC GTAGGTAACA GCAACGAATA CGAAGGTGAA GGTTTCGACC ACAGCTTCGA TCTGCCTGAG TTCCAGAACG AGCTGATCCA GAACATCGCC AAGGTCAACC CCAATACCGT GGTGACCATG TATGGCGGTA CGGGTCTGAA GATGAGCGAC TGGATCGAAC AGGTTCCAGC AGCGCTGCAC GCCTTCTATC CGGGTCAGAA CGGTGGTCAG GCCCTGGCCG AGATCCTCTT CGGCAAGGTC AACCCGTCGG GCAAGCTGCC GATCAGTATC GAACGCAACA TCGAAGACAA CCCGGCCTAC GCTTCCTTCC CGAAATTCGA CAACCAGAAC ACTCTGACCG ACATGGATTA CAAGGATGAC CTGCTGCTGG GTTATCGCGG TTACGAGAAG AAAGGCATCA AGCCGCTCTA TCCGTTCGGC TACGGTCTGT CGTACACCAC GTTCGGCTAC AGCAACATCA AGGTCACGCC GGGCGTCGCG GTCGGCAATA CACCGATCAA GGTGTCCTTC GACCTGAGCA ACACCGGCAA GGTCGGTGGT TCGGAAGTCG CTCAGCTGTA TGTGGGCCAG CAGAACCCGA AAGTCGAGCG TCCGATCAAG GAACTCAAAG GCTACAAGAA GGTGTTCCTC AAGCCGGGTG AAAGCAAGCG TGTGACCATC GAGCTGAATG ATCGCTCGCT GGCCTACTTC GATGAGAAGA GCAAGCAGTG GGTGGTCGAT GCCGACACCT TCAACATCTC GCTCGGTTCG TCGTCGCAGG ACATCCGCCT GAACGCCAAG CTGGTCAACT CGTTCCGTCA GGAACTGTCG ACCACCAGCA GCAACCCGCT GCCACGCTCC GCTCTGAACT CGGTCCTGGT CGAGAAACCA CCGGTCAAGA CCGGCGGTGT ATTCAAGCAG ACCGTTGAGT AA
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Protein sequence | MNKRKMMGAH SALALLALAV SQVHAADPTV QQGREDRAEK AAQKTLAKMT MEEKLAYIGG TGGWDVKPLT NYGVPQIHGA DGGVGVRYTS EGNDQGVVYP SGPNLAATFN PRRAIDLGRA LGYDTAVGGY QFITGPGVNL YRMPYGGRAF EYLSGEDPFL GASLAPGVIN GIQSRGVWAN AKHYAANDQE SNRFNLNQTM PERVLREMSL PAFESSSKNG NVAMMMCAFQ KVNGDFACES DHLIAQILKK EWGFKGFVQS DYNAVVHGFN AARAGTDLDM MGYQMNSSVL KPHLDAGDLS AATIDDKVRR ILKQIYLYKF DSKTPLTTHN MNSSTSNKVA LNAAREGIVL LKNQDNLLPL DKQKVKKIAV VGTLAKYSPP TGFGSANVMA SHYVSELSGL QQIAPNAKVD FIEGLSLDPS TSAWTTTDAT GNEVQGMKVE YFSNTNWSGD AAVTRTEKHV DLDWANDKNL PFESNTSTSD PYASKGSTAG QLNGDTSSTS IRYTGKVTPT QSGEQVFKVR ADGAVRLWVN GKKIIDNGDG KPLPGNSIPP TIPEFAKINL EAGQSYDVKL EYSRRAGYLS TMGGLVGVQL SSASLNAPQD LSGYDAVVVA VGNSNEYEGE GFDHSFDLPE FQNELIQNIA KVNPNTVVTM YGGTGLKMSD WIEQVPAALH AFYPGQNGGQ ALAEILFGKV NPSGKLPISI ERNIEDNPAY ASFPKFDNQN TLTDMDYKDD LLLGYRGYEK KGIKPLYPFG YGLSYTTFGY SNIKVTPGVA VGNTPIKVSF DLSNTGKVGG SEVAQLYVGQ QNPKVERPIK ELKGYKKVFL KPGESKRVTI ELNDRSLAYF DEKSKQWVVD ADTFNISLGS SSQDIRLNAK LVNSFRQELS TTSSNPLPRS ALNSVLVEKP PVKTGGVFKQ TVE
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