| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3151 |
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| Symbol | |
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| ID | 3368672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3775147 |
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| End bp | 3776904 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637653496 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_236221 |
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| Protein GI | 66046380 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.421515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.768585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCC GAAGTAGCAA AATGCCCTCA TTCATGCCGT CAGCTCCCGT CGATGTTTCC
CGTCTGCTCA TTCCGGATGC CCAGCAGGTT TGTGCCTGGC TGATCGAAAA TGCCGGTCTG
AAAACGGCCG ATCTGGAGCG CGCCCAGCGT CTGCAGCAGG AGTCGGAAGG TACTGAGTTG
CTAGGCCTGC TGACGCGTCT GGGCCTGGTC TCCGAATTCG AGCTGGCCCG CGCATGGGCG
GCATTGCTGC AGGCACCGTT GTTGCTCGCC GATGCTGTAC CACCGCTGCT GGACCCTTTG
CCGCCGCTGA CCGAACGCTT CATGCGCCAC TATCAAGTCG TACCGGTAGG CTGGAGCGAT
CAGGGCCTGC AAGTGCTCAG CGCCAACCCC GGCACGCTGT ACCCGTTTCA GGCCATCGCC
TATGCGTGCG AGGTGCCGGT GCGACTGTCC ATCGGCCCGC GCAATGAGGT CGAGACCCTT
ATCGAGCGCT ATTACGGGCA GGGCCGCTCG GCGATGGGCA CCCTGATCGA GAATCTGGAT
GAGGAGGGCG GCTCGCTGGA AGACATCGAG CACCTCAAGG ACCTGGCCTC CGAAGCGCCG
GTCATTCGTC TGGTCAACCT GATCCTGCAG CGTGCAGTAG AGCAGCGTGC ATCGGACATC
CACATCGAAC CGTTCGAGAG CCAGTTGAAG GTGCGTTATC GCATCGACGG CGTGCTGCAC
GAAGCGGAAG CGCCGCCATC CAGTTCTTCG GCAGCGGTGA TTTCCCGGGT GAAGATCATG
GCCCGCCTGG ACATCGCCGA GCGTCGTCTG CCGCAGGATG GCCGGATCAT GCTGCGCATC
CAGGGCAAGG AACTGGACCT GCGGGTATCG ACAGTGCCCA CCAGCTTTGG CGAATCAGTG
GTCATGCGTC TGCTGGACCG GCAGACCATC AATTTCGATT TCCCGAGCCT GGGTTTCGAT
GGCGAGCGGC TGGACGAATT TCTCGACGTG CTGGAGCGTC CGCACGGCAT TCTGCTGGTC
ACCGGGCCGA CCGGTTCCGG CAAGACCACC ACGCTGTATA CCGCGTTGTC ACGGCTCAAC
ACGGCCGAGC GCAAGATCAT CACCGTTGAA GACCCGGTCG AGTATCAGCT CGAAGGTATC
AACCAGATTC AGGTCAAGCC TTCCATCGGC CTGGATTTCG CCGGGGCGCT GCGCTCCATC
GTGCGTCAGG ACCCGGATGT CATCATGATC GGTGAGATGC GCGACCTGGA AACCTGCCGT
ATTGCCATCC AGTCCTCGTT GACCGGACAC CTGGTGCTCT CGACGCTGCA CACCAACAGC
GCAGCGGCGA GTATTACCCG CTTGCTGGAC ATGGGCGTCG AAAGCTATCT GATCGCTTCG
ACGGTCAACG GAATTCTGGC TCAGCGTCTG GTCCGTCGCC TCGATCCGGC AACCCGCGAG
GCCTTCGATG CGCCACCGGA GCTGATCGCC GAACACGGGC TGGAGCGTTT CACCGACGAG
CGGCCCATTC GTTTGTATCG CCCGCGTGCC GATGCGCCTG GCGGCGGCTA TCGCGGGCGT
AGTGCAATTA CCGAACTGCT GGTGATGAAC GAAGAACTGC GCAGTCTTTT GATGCGCCAC
GCCGACGCCT CGACGCTGGA AGAGGCTGCC CGACGTGGCG GTTTGCGCAC GCTGCATGAA
GAAGGCCTGC GTCAGGCCGT GGCCGGGGTG ACTTCGCTGG AAGAAGTGCT GCGCGTCACC
CGTGGTGAAG GCACATGA
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| Protein sequence | MSLRSSKMPS FMPSAPVDVS RLLIPDAQQV CAWLIENAGL KTADLERAQR LQQESEGTEL
LGLLTRLGLV SEFELARAWA ALLQAPLLLA DAVPPLLDPL PPLTERFMRH YQVVPVGWSD
QGLQVLSANP GTLYPFQAIA YACEVPVRLS IGPRNEVETL IERYYGQGRS AMGTLIENLD
EEGGSLEDIE HLKDLASEAP VIRLVNLILQ RAVEQRASDI HIEPFESQLK VRYRIDGVLH
EAEAPPSSSS AAVISRVKIM ARLDIAERRL PQDGRIMLRI QGKELDLRVS TVPTSFGESV
VMRLLDRQTI NFDFPSLGFD GERLDEFLDV LERPHGILLV TGPTGSGKTT TLYTALSRLN
TAERKIITVE DPVEYQLEGI NQIQVKPSIG LDFAGALRSI VRQDPDVIMI GEMRDLETCR
IAIQSSLTGH LVLSTLHTNS AAASITRLLD MGVESYLIAS TVNGILAQRL VRRLDPATRE
AFDAPPELIA EHGLERFTDE RPIRLYRPRA DAPGGGYRGR SAITELLVMN EELRSLLMRH
ADASTLEEAA RRGGLRTLHE EGLRQAVAGV TSLEEVLRVT RGEGT
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